Gene : AT1G71080 A. thaliana TAIR10
Defline:  (1 of 2) K15186 - ELL-associated factor (EAF) Genomic Order:  6072
Name:  ? AT1G71080 Secondary Identifier:  ? PAC:19657230
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G71080 0.5kb upstream 0.5kb upstream 2502 true Chr1: 26809841-26812342 Arabidopsis thaliana
AT1G71080 0.5kb upstream 0.5kb upstream 500 false Chr1: 26811843-26812342 Arabidopsis thaliana
AT1G71080 0.5kb downstream 0.5kb downstream 2502 true Chr1: 26809341-26811842 Arabidopsis thaliana
AT1G71080 0.5kb downstream 0.5kb downstream 500 false Chr1: 26809341-26809840 Arabidopsis thaliana
AT1G71080 1.0kb upstream 1.0kb upstream 3002 true Chr1: 26809841-26812842 Arabidopsis thaliana
AT1G71080 1.0kb upstream 1.0kb upstream 1000 false Chr1: 26811843-26812842 Arabidopsis thaliana
AT1G71080 1.0kb downstream 1.0kb downstream 3002 true Chr1: 26808841-26811842 Arabidopsis thaliana
AT1G71080 1.0kb downstream 1.0kb downstream 1000 false Chr1: 26808841-26809840 Arabidopsis thaliana
AT1G71080 2.0kb upstream 2.0kb upstream 4002 true Chr1: 26809841-26813842 Arabidopsis thaliana
AT1G71080 2.0kb upstream 2.0kb upstream 2000 false Chr1: 26811843-26813842 Arabidopsis thaliana
AT1G71080 2.0kb downstream 2.0kb downstream 4002 true Chr1: 26807841-26811842 Arabidopsis thaliana
AT1G71080 2.0kb downstream 2.0kb downstream 2000 false Chr1: 26807841-26809840 Arabidopsis thaliana
AT1G71080 5.0kb upstream 5.0kb upstream 7002 true Chr1: 26809841-26816842 Arabidopsis thaliana
AT1G71080 5.0kb upstream 5.0kb upstream 5000 false Chr1: 26811843-26816842 Arabidopsis thaliana
AT1G71080 5.0kb downstream 5.0kb downstream 7002 true Chr1: 26804841-26811842 Arabidopsis thaliana
AT1G71080 5.0kb downstream 5.0kb downstream 5000 false Chr1: 26804841-26809840 Arabidopsis thaliana
AT1G71080 10.0kb upstream 10.0kb upstream 12002 true Chr1: 26809841-26821842 Arabidopsis thaliana
AT1G71080 10.0kb upstream 10.0kb upstream 10000 false Chr1: 26811843-26821842 Arabidopsis thaliana
AT1G71080 10.0kb downstream 10.0kb downstream 12002 true Chr1: 26799841-26811842 Arabidopsis thaliana
AT1G71080 10.0kb downstream 10.0kb downstream 10000 false Chr1: 26799841-26809840 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369337 5261 Brassicaceae View MSA
123838905 5264 Brassicales-Malvales View MSA
124347123 5266 SBM View MSA
124245321 5268 Malvidae View MSA
124060442 5270 Rosid View MSA
123736419 5271 Pentapetalae View MSA
122791922 5272 Eudicot View MSA
122044960 5273 Angiosperm View MSA
121347261 5274 Embryophyte View MSA
123428623 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.95       Low
cufflinks 40.392     High  
cufflinks 36.461     High  
cufflinks 52.424     High High
cufflinks 39.348     High  
cufflinks 40.458     High  

0 Strain