Gene : AT1G71000 A. thaliana TAIR10
Defline:  (1 of 97) PF00226 - DnaJ domain (DnaJ) Genomic Order:  6063
Name:  ? AT1G71000 Secondary Identifier:  ? PAC:19657392
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G71000 0.5kb upstream 0.5kb upstream 1276 true Chr1: 26769336-26770611 Arabidopsis thaliana
AT1G71000 0.5kb upstream 0.5kb upstream 500 false Chr1: 26770112-26770611 Arabidopsis thaliana
AT1G71000 0.5kb downstream 0.5kb downstream 1276 true Chr1: 26768836-26770111 Arabidopsis thaliana
AT1G71000 0.5kb downstream 0.5kb downstream 500 false Chr1: 26768836-26769335 Arabidopsis thaliana
AT1G71000 1.0kb upstream 1.0kb upstream 1776 true Chr1: 26769336-26771111 Arabidopsis thaliana
AT1G71000 1.0kb upstream 1.0kb upstream 1000 false Chr1: 26770112-26771111 Arabidopsis thaliana
AT1G71000 1.0kb downstream 1.0kb downstream 1776 true Chr1: 26768336-26770111 Arabidopsis thaliana
AT1G71000 1.0kb downstream 1.0kb downstream 1000 false Chr1: 26768336-26769335 Arabidopsis thaliana
AT1G71000 2.0kb upstream 2.0kb upstream 2776 true Chr1: 26769336-26772111 Arabidopsis thaliana
AT1G71000 2.0kb upstream 2.0kb upstream 2000 false Chr1: 26770112-26772111 Arabidopsis thaliana
AT1G71000 2.0kb downstream 2.0kb downstream 2776 true Chr1: 26767336-26770111 Arabidopsis thaliana
AT1G71000 2.0kb downstream 2.0kb downstream 2000 false Chr1: 26767336-26769335 Arabidopsis thaliana
AT1G71000 5.0kb upstream 5.0kb upstream 5776 true Chr1: 26769336-26775111 Arabidopsis thaliana
AT1G71000 5.0kb upstream 5.0kb upstream 5000 false Chr1: 26770112-26775111 Arabidopsis thaliana
AT1G71000 5.0kb downstream 5.0kb downstream 5776 true Chr1: 26764336-26770111 Arabidopsis thaliana
AT1G71000 5.0kb downstream 5.0kb downstream 5000 false Chr1: 26764336-26769335 Arabidopsis thaliana
AT1G71000 10.0kb upstream 10.0kb upstream 10776 true Chr1: 26769336-26780111 Arabidopsis thaliana
AT1G71000 10.0kb upstream 10.0kb upstream 10000 false Chr1: 26770112-26780111 Arabidopsis thaliana
AT1G71000 10.0kb downstream 10.0kb downstream 10776 true Chr1: 26759336-26770111 Arabidopsis thaliana
AT1G71000 10.0kb downstream 10.0kb downstream 10000 false Chr1: 26759336-26769335 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360335 5261 Brassicaceae View MSA
123836181 5264 Brassicales-Malvales View MSA
124337805 5266 SBM View MSA
124251895 5268 Malvidae View MSA
124064928 5270 Rosid View MSA
123742769 5271 Pentapetalae View MSA
122796885 5272 Eudicot View MSA
122048239 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121310900 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.151     Low  
cufflinks 0.215     Low  
cufflinks 0.447        
cufflinks 0.966       High
cufflinks 0.173     Low  
cufflinks 0.269     Low  

0 Strain