Gene : PG2 A. thaliana TAIR10
Primary Identifier:  ? AT1G70370 Defline:  (1 of 3) PTHR31458//PTHR31458:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE NON-CATALYTIC SUBUNIT JP630-RELATED
Genomic Order:  5995 Name:  ? AT1G70370
Secondary Identifier:  ? PAC:19653330
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G70370 0.5kb upstream 0.5kb upstream 3008 true Chr1: 26512681-26515688 Arabidopsis thaliana
AT1G70370 0.5kb upstream 0.5kb upstream 500 false Chr1: 26515189-26515688 Arabidopsis thaliana
AT1G70370 0.5kb downstream 0.5kb downstream 3008 true Chr1: 26512181-26515188 Arabidopsis thaliana
AT1G70370 0.5kb downstream 0.5kb downstream 500 false Chr1: 26512181-26512680 Arabidopsis thaliana
AT1G70370 1.0kb upstream 1.0kb upstream 3508 true Chr1: 26512681-26516188 Arabidopsis thaliana
AT1G70370 1.0kb upstream 1.0kb upstream 1000 false Chr1: 26515189-26516188 Arabidopsis thaliana
AT1G70370 1.0kb downstream 1.0kb downstream 3508 true Chr1: 26511681-26515188 Arabidopsis thaliana
AT1G70370 1.0kb downstream 1.0kb downstream 1000 false Chr1: 26511681-26512680 Arabidopsis thaliana
AT1G70370 2.0kb upstream 2.0kb upstream 4508 true Chr1: 26512681-26517188 Arabidopsis thaliana
AT1G70370 2.0kb upstream 2.0kb upstream 2000 false Chr1: 26515189-26517188 Arabidopsis thaliana
AT1G70370 2.0kb downstream 2.0kb downstream 4508 true Chr1: 26510681-26515188 Arabidopsis thaliana
AT1G70370 2.0kb downstream 2.0kb downstream 2000 false Chr1: 26510681-26512680 Arabidopsis thaliana
AT1G70370 5.0kb upstream 5.0kb upstream 7508 true Chr1: 26512681-26520188 Arabidopsis thaliana
AT1G70370 5.0kb upstream 5.0kb upstream 5000 false Chr1: 26515189-26520188 Arabidopsis thaliana
AT1G70370 5.0kb downstream 5.0kb downstream 7508 true Chr1: 26507681-26515188 Arabidopsis thaliana
AT1G70370 5.0kb downstream 5.0kb downstream 5000 false Chr1: 26507681-26512680 Arabidopsis thaliana
AT1G70370 10.0kb upstream 10.0kb upstream 12508 true Chr1: 26512681-26525188 Arabidopsis thaliana
AT1G70370 10.0kb upstream 10.0kb upstream 10000 false Chr1: 26515189-26525188 Arabidopsis thaliana
AT1G70370 10.0kb downstream 10.0kb downstream 12508 true Chr1: 26502681-26515188 Arabidopsis thaliana
AT1G70370 10.0kb downstream 10.0kb downstream 10000 false Chr1: 26502681-26512680 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361299 5261 Brassicaceae View MSA
123832587 5264 Brassicales-Malvales View MSA
124343319 5266 SBM View MSA
124238820 5268 Malvidae View MSA
124060515 5270 Rosid View MSA
123747690 5271 Pentapetalae View MSA
122795038 5272 Eudicot View MSA
122050223 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.934        
cufflinks 54.999     High  
cufflinks 23.753        
cufflinks 44.876     High  
cufflinks 14.322       Low
cufflinks 67.617     High High

0 Strain