Gene : AT1G70400 A. thaliana TAIR10
Defline:  (1 of 2) PTHR13904 - PRE-MRNA SPLICING FACTOR PRP31 Genomic Order:  5998
Name:  ? AT1G70400 Secondary Identifier:  ? PAC:19654077
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G70400 0.5kb upstream 0.5kb upstream 2562 true Chr1: 26531399-26533960 Arabidopsis thaliana
AT1G70400 0.5kb upstream 0.5kb upstream 500 false Chr1: 26533461-26533960 Arabidopsis thaliana
AT1G70400 0.5kb downstream 0.5kb downstream 2562 true Chr1: 26530899-26533460 Arabidopsis thaliana
AT1G70400 0.5kb downstream 0.5kb downstream 500 false Chr1: 26530899-26531398 Arabidopsis thaliana
AT1G70400 1.0kb upstream 1.0kb upstream 3062 true Chr1: 26531399-26534460 Arabidopsis thaliana
AT1G70400 1.0kb upstream 1.0kb upstream 1000 false Chr1: 26533461-26534460 Arabidopsis thaliana
AT1G70400 1.0kb downstream 1.0kb downstream 3062 true Chr1: 26530399-26533460 Arabidopsis thaliana
AT1G70400 1.0kb downstream 1.0kb downstream 1000 false Chr1: 26530399-26531398 Arabidopsis thaliana
AT1G70400 2.0kb upstream 2.0kb upstream 4062 true Chr1: 26531399-26535460 Arabidopsis thaliana
AT1G70400 2.0kb upstream 2.0kb upstream 2000 false Chr1: 26533461-26535460 Arabidopsis thaliana
AT1G70400 2.0kb downstream 2.0kb downstream 4062 true Chr1: 26529399-26533460 Arabidopsis thaliana
AT1G70400 2.0kb downstream 2.0kb downstream 2000 false Chr1: 26529399-26531398 Arabidopsis thaliana
AT1G70400 5.0kb upstream 5.0kb upstream 7062 true Chr1: 26531399-26538460 Arabidopsis thaliana
AT1G70400 5.0kb upstream 5.0kb upstream 5000 false Chr1: 26533461-26538460 Arabidopsis thaliana
AT1G70400 5.0kb downstream 5.0kb downstream 7062 true Chr1: 26526399-26533460 Arabidopsis thaliana
AT1G70400 5.0kb downstream 5.0kb downstream 5000 false Chr1: 26526399-26531398 Arabidopsis thaliana
AT1G70400 10.0kb upstream 10.0kb upstream 12062 true Chr1: 26531399-26543460 Arabidopsis thaliana
AT1G70400 10.0kb upstream 10.0kb upstream 10000 false Chr1: 26533461-26543460 Arabidopsis thaliana
AT1G70400 10.0kb downstream 10.0kb downstream 12062 true Chr1: 26521399-26533460 Arabidopsis thaliana
AT1G70400 10.0kb downstream 10.0kb downstream 10000 false Chr1: 26521399-26531398 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121493393 5273 Angiosperm Singleton cluster - no MSA
122328727 5261 Brassicaceae Singleton cluster - no MSA
123770066 5264 Brassicales-Malvales Singleton cluster - no MSA
124268614 5266 SBM Singleton cluster - no MSA
124124804 5268 Malvidae Singleton cluster - no MSA
123853807 5270 Rosid Singleton cluster - no MSA
123439859 5271 Pentapetalae Singleton cluster - no MSA
122475449 5272 Eudicot Singleton cluster - no MSA
120766767 5274 Embryophyte Singleton cluster - no MSA
122809167 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain