Gene : AT1G70420 A. thaliana TAIR10
Defline:  (1 of 7) PF07816 - Protein of unknown function (DUF1645) (DUF1645) Genomic Order:  6000
Name:  ? AT1G70420 Secondary Identifier:  ? PAC:19654914
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G70420 0.5kb upstream 0.5kb upstream 1689 true Chr1: 26539574-26541262 Arabidopsis thaliana
AT1G70420 0.5kb upstream 0.5kb upstream 500 false Chr1: 26540763-26541262 Arabidopsis thaliana
AT1G70420 0.5kb downstream 0.5kb downstream 1689 true Chr1: 26539074-26540762 Arabidopsis thaliana
AT1G70420 0.5kb downstream 0.5kb downstream 500 false Chr1: 26539074-26539573 Arabidopsis thaliana
AT1G70420 1.0kb upstream 1.0kb upstream 2189 true Chr1: 26539574-26541762 Arabidopsis thaliana
AT1G70420 1.0kb upstream 1.0kb upstream 1000 false Chr1: 26540763-26541762 Arabidopsis thaliana
AT1G70420 1.0kb downstream 1.0kb downstream 2189 true Chr1: 26538574-26540762 Arabidopsis thaliana
AT1G70420 1.0kb downstream 1.0kb downstream 1000 false Chr1: 26538574-26539573 Arabidopsis thaliana
AT1G70420 2.0kb upstream 2.0kb upstream 3189 true Chr1: 26539574-26542762 Arabidopsis thaliana
AT1G70420 2.0kb upstream 2.0kb upstream 2000 false Chr1: 26540763-26542762 Arabidopsis thaliana
AT1G70420 2.0kb downstream 2.0kb downstream 3189 true Chr1: 26537574-26540762 Arabidopsis thaliana
AT1G70420 2.0kb downstream 2.0kb downstream 2000 false Chr1: 26537574-26539573 Arabidopsis thaliana
AT1G70420 5.0kb upstream 5.0kb upstream 6189 true Chr1: 26539574-26545762 Arabidopsis thaliana
AT1G70420 5.0kb upstream 5.0kb upstream 5000 false Chr1: 26540763-26545762 Arabidopsis thaliana
AT1G70420 5.0kb downstream 5.0kb downstream 6189 true Chr1: 26534574-26540762 Arabidopsis thaliana
AT1G70420 5.0kb downstream 5.0kb downstream 5000 false Chr1: 26534574-26539573 Arabidopsis thaliana
AT1G70420 10.0kb upstream 10.0kb upstream 11189 true Chr1: 26539574-26550762 Arabidopsis thaliana
AT1G70420 10.0kb upstream 10.0kb upstream 10000 false Chr1: 26540763-26550762 Arabidopsis thaliana
AT1G70420 10.0kb downstream 10.0kb downstream 11189 true Chr1: 26529574-26540762 Arabidopsis thaliana
AT1G70420 10.0kb downstream 10.0kb downstream 10000 false Chr1: 26529574-26539573 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375709 5261 Brassicaceae View MSA
123836649 5264 Brassicales-Malvales View MSA
124345489 5266 SBM View MSA
124246091 5268 Malvidae View MSA
124070219 5270 Rosid View MSA
123743916 5271 Pentapetalae View MSA
122785611 5272 Eudicot View MSA
122048154 5273 Angiosperm View MSA
121310868 5274 Embryophyte View MSA
123348251 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.547        
cufflinks 15.214       High
cufflinks 6.227       Low
cufflinks 15.92       High
cufflinks 9.034        
cufflinks 12.089        

0 Strain