Gene : AT1G79740 A. thaliana TAIR10
Defline:  (1 of 1) PTHR32166//PTHR32166:SF17 - FAMILY NOT NAMED // HAT FAMILY DIMERIZATION DOMAIN-CONTAINING PROTEIN Genomic Order:  6951
Name:  ? AT1G79740 Secondary Identifier:  ? PAC:19650126
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G79740 0.5kb upstream 0.5kb upstream 3154 true Chr1: 30004367-30007520 Arabidopsis thaliana
AT1G79740 0.5kb upstream 0.5kb upstream 500 false Chr1: 30007021-30007520 Arabidopsis thaliana
AT1G79740 0.5kb downstream 0.5kb downstream 3154 true Chr1: 30003867-30007020 Arabidopsis thaliana
AT1G79740 0.5kb downstream 0.5kb downstream 500 false Chr1: 30003867-30004366 Arabidopsis thaliana
AT1G79740 1.0kb upstream 1.0kb upstream 3654 true Chr1: 30004367-30008020 Arabidopsis thaliana
AT1G79740 1.0kb upstream 1.0kb upstream 1000 false Chr1: 30007021-30008020 Arabidopsis thaliana
AT1G79740 1.0kb downstream 1.0kb downstream 3654 true Chr1: 30003367-30007020 Arabidopsis thaliana
AT1G79740 1.0kb downstream 1.0kb downstream 1000 false Chr1: 30003367-30004366 Arabidopsis thaliana
AT1G79740 2.0kb upstream 2.0kb upstream 4654 true Chr1: 30004367-30009020 Arabidopsis thaliana
AT1G79740 2.0kb upstream 2.0kb upstream 2000 false Chr1: 30007021-30009020 Arabidopsis thaliana
AT1G79740 2.0kb downstream 2.0kb downstream 4654 true Chr1: 30002367-30007020 Arabidopsis thaliana
AT1G79740 2.0kb downstream 2.0kb downstream 2000 false Chr1: 30002367-30004366 Arabidopsis thaliana
AT1G79740 5.0kb upstream 5.0kb upstream 7654 true Chr1: 30004367-30012020 Arabidopsis thaliana
AT1G79740 5.0kb upstream 5.0kb upstream 5000 false Chr1: 30007021-30012020 Arabidopsis thaliana
AT1G79740 5.0kb downstream 5.0kb downstream 7654 true Chr1: 29999367-30007020 Arabidopsis thaliana
AT1G79740 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29999367-30004366 Arabidopsis thaliana
AT1G79740 10.0kb upstream 10.0kb upstream 12654 true Chr1: 30004367-30017020 Arabidopsis thaliana
AT1G79740 10.0kb upstream 10.0kb upstream 10000 false Chr1: 30007021-30017020 Arabidopsis thaliana
AT1G79740 10.0kb downstream 10.0kb downstream 12654 true Chr1: 29994367-30007020 Arabidopsis thaliana
AT1G79740 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29994367-30004366 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331868 5261 Brassicaceae View MSA
123834394 5264 Brassicales-Malvales View MSA
124321946 5266 SBM View MSA
124244772 5268 Malvidae View MSA
124061842 5270 Rosid View MSA
123752967 5271 Pentapetalae View MSA
122794205 5272 Eudicot View MSA
122051703 5273 Angiosperm View MSA
121347820 5274 Embryophyte View MSA
123428458 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.496        
cufflinks 17.415       High
cufflinks 10.367        
cufflinks 15.555        
cufflinks 9.432       Low
cufflinks 14.05        

0 Strain