Gene : RAD23B A. thaliana TAIR10
Primary Identifier:  ? AT1G79650 Defline:  (1 of 2) PTHR10621//PTHR10621:SF9 - UV EXCISION REPAIR PROTEIN RAD23 // F12F1.16 PROTEIN-RELATED
Genomic Order:  6942 Name:  ? AT1G79650
Secondary Identifier:  ? PAC:19653826
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G79650 0.5kb upstream 0.5kb upstream 3674 true Chr1: 29972108-29975781 Arabidopsis thaliana
AT1G79650 0.5kb upstream 0.5kb upstream 500 false Chr1: 29975282-29975781 Arabidopsis thaliana
AT1G79650 0.5kb downstream 0.5kb downstream 3674 true Chr1: 29971608-29975281 Arabidopsis thaliana
AT1G79650 0.5kb downstream 0.5kb downstream 500 false Chr1: 29971608-29972107 Arabidopsis thaliana
AT1G79650 1.0kb upstream 1.0kb upstream 4174 true Chr1: 29972108-29976281 Arabidopsis thaliana
AT1G79650 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29975282-29976281 Arabidopsis thaliana
AT1G79650 1.0kb downstream 1.0kb downstream 4174 true Chr1: 29971108-29975281 Arabidopsis thaliana
AT1G79650 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29971108-29972107 Arabidopsis thaliana
AT1G79650 2.0kb upstream 2.0kb upstream 5174 true Chr1: 29972108-29977281 Arabidopsis thaliana
AT1G79650 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29975282-29977281 Arabidopsis thaliana
AT1G79650 2.0kb downstream 2.0kb downstream 5174 true Chr1: 29970108-29975281 Arabidopsis thaliana
AT1G79650 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29970108-29972107 Arabidopsis thaliana
AT1G79650 5.0kb upstream 5.0kb upstream 8174 true Chr1: 29972108-29980281 Arabidopsis thaliana
AT1G79650 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29975282-29980281 Arabidopsis thaliana
AT1G79650 5.0kb downstream 5.0kb downstream 8174 true Chr1: 29967108-29975281 Arabidopsis thaliana
AT1G79650 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29967108-29972107 Arabidopsis thaliana
AT1G79650 10.0kb upstream 10.0kb upstream 13174 true Chr1: 29972108-29985281 Arabidopsis thaliana
AT1G79650 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29975282-29985281 Arabidopsis thaliana
AT1G79650 10.0kb downstream 10.0kb downstream 13174 true Chr1: 29962108-29975281 Arabidopsis thaliana
AT1G79650 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29962108-29972107 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370260 5261 Brassicaceae View MSA
123839172 5264 Brassicales-Malvales View MSA
124341735 5266 SBM View MSA
124250812 5268 Malvidae View MSA
124061824 5270 Rosid View MSA
123740240 5271 Pentapetalae View MSA
122785996 5272 Eudicot View MSA
122046102 5273 Angiosperm View MSA
121350140 5274 Embryophyte View MSA
123423951 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.195        
cufflinks 3.681        
cufflinks 1.939       Low
cufflinks 3.727        
cufflinks 2.02        
cufflinks 4.104       High

0 Strain