Gene : RFO1 A. thaliana TAIR10
Primary Identifier:  ? AT1G79670 Defline:  (1 of 6) PF07714//PF08488//PF13947 - Protein tyrosine kinase (Pkinase_Tyr) // Wall-associated kinase (WAK) // Wall-associated receptor kinase galacturonan-binding (GUB_WAK_bind)
Genomic Order:  6944 Name:  ? AT1G79670
Secondary Identifier:  ? PAC:19650356
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G79670 0.5kb upstream 0.5kb upstream 3126 true Chr1: 29976725-29979850 Arabidopsis thaliana
AT1G79670 0.5kb upstream 0.5kb upstream 500 false Chr1: 29979351-29979850 Arabidopsis thaliana
AT1G79670 0.5kb downstream 0.5kb downstream 3126 true Chr1: 29976225-29979350 Arabidopsis thaliana
AT1G79670 0.5kb downstream 0.5kb downstream 500 false Chr1: 29976225-29976724 Arabidopsis thaliana
AT1G79670 1.0kb upstream 1.0kb upstream 3626 true Chr1: 29976725-29980350 Arabidopsis thaliana
AT1G79670 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29979351-29980350 Arabidopsis thaliana
AT1G79670 1.0kb downstream 1.0kb downstream 3626 true Chr1: 29975725-29979350 Arabidopsis thaliana
AT1G79670 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29975725-29976724 Arabidopsis thaliana
AT1G79670 2.0kb upstream 2.0kb upstream 4626 true Chr1: 29976725-29981350 Arabidopsis thaliana
AT1G79670 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29979351-29981350 Arabidopsis thaliana
AT1G79670 2.0kb downstream 2.0kb downstream 4626 true Chr1: 29974725-29979350 Arabidopsis thaliana
AT1G79670 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29974725-29976724 Arabidopsis thaliana
AT1G79670 5.0kb upstream 5.0kb upstream 7626 true Chr1: 29976725-29984350 Arabidopsis thaliana
AT1G79670 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29979351-29984350 Arabidopsis thaliana
AT1G79670 5.0kb downstream 5.0kb downstream 7626 true Chr1: 29971725-29979350 Arabidopsis thaliana
AT1G79670 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29971725-29976724 Arabidopsis thaliana
AT1G79670 10.0kb upstream 10.0kb upstream 12626 true Chr1: 29976725-29989350 Arabidopsis thaliana
AT1G79670 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29979351-29989350 Arabidopsis thaliana
AT1G79670 10.0kb downstream 10.0kb downstream 12626 true Chr1: 29966725-29979350 Arabidopsis thaliana
AT1G79670 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29966725-29976724 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378265 5261 Brassicaceae View MSA
123841104 5264 Brassicales-Malvales View MSA
124349781 5266 SBM View MSA
124254522 5268 Malvidae View MSA
124072250 5270 Rosid View MSA
123752135 5271 Pentapetalae View MSA
122797292 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.762       High
cufflinks 4.97        
cufflinks 5.721        
cufflinks 5.468        
cufflinks 7.521       High
cufflinks 4.1       Low

0 Strain