Gene : AT1G79520 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11562:SF20 - METAL TOLERANCE PROTEIN 10-RELATED Genomic Order:  6929
Name:  ? AT1G79520 Secondary Identifier:  ? PAC:19655478
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G79520 0.5kb upstream 0.5kb upstream 2865 true Chr1: 29912251-29915115 Arabidopsis thaliana
AT1G79520 0.5kb upstream 0.5kb upstream 500 false Chr1: 29914616-29915115 Arabidopsis thaliana
AT1G79520 0.5kb downstream 0.5kb downstream 2865 true Chr1: 29911751-29914615 Arabidopsis thaliana
AT1G79520 0.5kb downstream 0.5kb downstream 500 false Chr1: 29911751-29912250 Arabidopsis thaliana
AT1G79520 1.0kb upstream 1.0kb upstream 3365 true Chr1: 29912251-29915615 Arabidopsis thaliana
AT1G79520 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29914616-29915615 Arabidopsis thaliana
AT1G79520 1.0kb downstream 1.0kb downstream 3365 true Chr1: 29911251-29914615 Arabidopsis thaliana
AT1G79520 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29911251-29912250 Arabidopsis thaliana
AT1G79520 2.0kb upstream 2.0kb upstream 4365 true Chr1: 29912251-29916615 Arabidopsis thaliana
AT1G79520 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29914616-29916615 Arabidopsis thaliana
AT1G79520 2.0kb downstream 2.0kb downstream 4365 true Chr1: 29910251-29914615 Arabidopsis thaliana
AT1G79520 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29910251-29912250 Arabidopsis thaliana
AT1G79520 5.0kb upstream 5.0kb upstream 7365 true Chr1: 29912251-29919615 Arabidopsis thaliana
AT1G79520 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29914616-29919615 Arabidopsis thaliana
AT1G79520 5.0kb downstream 5.0kb downstream 7365 true Chr1: 29907251-29914615 Arabidopsis thaliana
AT1G79520 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29907251-29912250 Arabidopsis thaliana
AT1G79520 10.0kb upstream 10.0kb upstream 12365 true Chr1: 29912251-29924615 Arabidopsis thaliana
AT1G79520 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29914616-29924615 Arabidopsis thaliana
AT1G79520 10.0kb downstream 10.0kb downstream 12365 true Chr1: 29902251-29914615 Arabidopsis thaliana
AT1G79520 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29902251-29912250 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373043 5261 Brassicaceae View MSA
123834970 5264 Brassicales-Malvales View MSA
124344834 5266 SBM View MSA
124245326 5268 Malvidae View MSA
124070394 5270 Rosid View MSA
123746602 5271 Pentapetalae View MSA
122792953 5272 Eudicot View MSA
122045121 5273 Angiosperm View MSA
121345008 5274 Embryophyte View MSA
123428793 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.894        
cufflinks 7.609        
cufflinks 3.758       Low
cufflinks 7.496        
cufflinks 7.174        
cufflinks 5.186        

0 Strain