Gene : PGK A. thaliana TAIR10
Primary Identifier:  ? AT1G79550 Defline:  (1 of 1) PTHR11406//PTHR11406:SF9 - PHOSPHOGLYCERATE KINASE // PHOSPHOGLYCERATE KINASE
Genomic Order:  6932 Name:  ? AT1G79550
Secondary Identifier:  ? PAC:19653788
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Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ANAEROFRUCAT-PWY Arabidopsis thaliana pathologic  
Athaliana ANAGLYCOLYSIS-PWY Arabidopsis thaliana pathologic  
Athaliana CALVIN-PWY Arabidopsis thaliana pathologic  
Athaliana GLUCONEO-PWY Arabidopsis thaliana pathologic  
Athaliana PHOTOALL-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-1042 Arabidopsis thaliana pathologic  
Athaliana PWY-5464 Arabidopsis thaliana pathologic  
Athaliana PWY66-399 Arabidopsis thaliana pathologic  
Athaliana SUCSYN-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G79550 0.5kb upstream 0.5kb upstream 3060 true Chr1: 29924023-29927082 Arabidopsis thaliana
AT1G79550 0.5kb upstream 0.5kb upstream 500 false Chr1: 29926583-29927082 Arabidopsis thaliana
AT1G79550 0.5kb downstream 0.5kb downstream 3060 true Chr1: 29923523-29926582 Arabidopsis thaliana
AT1G79550 0.5kb downstream 0.5kb downstream 500 false Chr1: 29923523-29924022 Arabidopsis thaliana
AT1G79550 1.0kb upstream 1.0kb upstream 3560 true Chr1: 29924023-29927582 Arabidopsis thaliana
AT1G79550 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29926583-29927582 Arabidopsis thaliana
AT1G79550 1.0kb downstream 1.0kb downstream 3560 true Chr1: 29923023-29926582 Arabidopsis thaliana
AT1G79550 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29923023-29924022 Arabidopsis thaliana
AT1G79550 2.0kb upstream 2.0kb upstream 4560 true Chr1: 29924023-29928582 Arabidopsis thaliana
AT1G79550 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29926583-29928582 Arabidopsis thaliana
AT1G79550 2.0kb downstream 2.0kb downstream 4560 true Chr1: 29922023-29926582 Arabidopsis thaliana
AT1G79550 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29922023-29924022 Arabidopsis thaliana
AT1G79550 5.0kb upstream 5.0kb upstream 7560 true Chr1: 29924023-29931582 Arabidopsis thaliana
AT1G79550 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29926583-29931582 Arabidopsis thaliana
AT1G79550 5.0kb downstream 5.0kb downstream 7560 true Chr1: 29919023-29926582 Arabidopsis thaliana
AT1G79550 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29919023-29924022 Arabidopsis thaliana
AT1G79550 10.0kb upstream 10.0kb upstream 12560 true Chr1: 29924023-29936582 Arabidopsis thaliana
AT1G79550 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29926583-29936582 Arabidopsis thaliana
AT1G79550 10.0kb downstream 10.0kb downstream 12560 true Chr1: 29914023-29926582 Arabidopsis thaliana
AT1G79550 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29914023-29924022 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040878 5273 Angiosperm View MSA
122370985 5261 Brassicaceae View MSA
123830629 5264 Brassicales-Malvales View MSA
124340195 5266 SBM View MSA
124253761 5268 Malvidae View MSA
124067355 5270 Rosid View MSA
123751254 5271 Pentapetalae View MSA
122790171 5272 Eudicot View MSA
121348563 5274 Embryophyte View MSA
123423936 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 51.061     High  
cufflinks 73.14     High  
cufflinks 43.281     High Low
cufflinks 89.515     High High
cufflinks 46.486     High  
cufflinks 91.18     High High

0 Strain