Gene : AT1G79570 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23257//PTHR23257:SF537 - SERINE-THREONINE PROTEIN KINASE // PROTEIN KINASE FAMILY PROTEIN Genomic Order:  6934
Name:  ? AT1G79570 Secondary Identifier:  ? PAC:19653568
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G79570 0.5kb upstream 0.5kb upstream 6779 true Chr1: 29932578-29939356 Arabidopsis thaliana
AT1G79570 0.5kb upstream 0.5kb upstream 500 false Chr1: 29938857-29939356 Arabidopsis thaliana
AT1G79570 0.5kb downstream 0.5kb downstream 6779 true Chr1: 29932078-29938856 Arabidopsis thaliana
AT1G79570 0.5kb downstream 0.5kb downstream 500 false Chr1: 29932078-29932577 Arabidopsis thaliana
AT1G79570 1.0kb upstream 1.0kb upstream 7279 true Chr1: 29932578-29939856 Arabidopsis thaliana
AT1G79570 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29938857-29939856 Arabidopsis thaliana
AT1G79570 1.0kb downstream 1.0kb downstream 7279 true Chr1: 29931578-29938856 Arabidopsis thaliana
AT1G79570 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29931578-29932577 Arabidopsis thaliana
AT1G79570 2.0kb upstream 2.0kb upstream 8279 true Chr1: 29932578-29940856 Arabidopsis thaliana
AT1G79570 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29938857-29940856 Arabidopsis thaliana
AT1G79570 2.0kb downstream 2.0kb downstream 8279 true Chr1: 29930578-29938856 Arabidopsis thaliana
AT1G79570 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29930578-29932577 Arabidopsis thaliana
AT1G79570 5.0kb upstream 5.0kb upstream 11279 true Chr1: 29932578-29943856 Arabidopsis thaliana
AT1G79570 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29938857-29943856 Arabidopsis thaliana
AT1G79570 5.0kb downstream 5.0kb downstream 11279 true Chr1: 29927578-29938856 Arabidopsis thaliana
AT1G79570 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29927578-29932577 Arabidopsis thaliana
AT1G79570 10.0kb upstream 10.0kb upstream 16279 true Chr1: 29932578-29948856 Arabidopsis thaliana
AT1G79570 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29938857-29948856 Arabidopsis thaliana
AT1G79570 10.0kb downstream 10.0kb downstream 16279 true Chr1: 29922578-29938856 Arabidopsis thaliana
AT1G79570 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29922578-29932577 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365904 5261 Brassicaceae View MSA
123836116 5264 Brassicales-Malvales View MSA
124340219 5266 SBM View MSA
124251451 5268 Malvidae View MSA
124066314 5270 Rosid View MSA
123749730 5271 Pentapetalae View MSA
122796699 5272 Eudicot View MSA
122043276 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350927 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.874        
cufflinks 7.969       Low
cufflinks 9.363        
cufflinks 9.109        
cufflinks 9.969        
cufflinks 9.121        

0 Strain