Gene : NUA A. thaliana TAIR10
Primary Identifier:  ? AT1G79280 Defline:  (1 of 1) K09291 - nucleoprotein TPR (TPR, MLP1, MLP2)
Genomic Order:  6907 Name:  ? AT1G79280
Secondary Identifier:  ? PAC:19654057
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G79280 0.5kb upstream 0.5kb upstream 14375 true Chr1: 29819142-29833516 Arabidopsis thaliana
AT1G79280 0.5kb upstream 0.5kb upstream 500 false Chr1: 29833017-29833516 Arabidopsis thaliana
AT1G79280 0.5kb downstream 0.5kb downstream 14375 true Chr1: 29818642-29833016 Arabidopsis thaliana
AT1G79280 0.5kb downstream 0.5kb downstream 500 false Chr1: 29818642-29819141 Arabidopsis thaliana
AT1G79280 1.0kb upstream 1.0kb upstream 14875 true Chr1: 29819142-29834016 Arabidopsis thaliana
AT1G79280 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29833017-29834016 Arabidopsis thaliana
AT1G79280 1.0kb downstream 1.0kb downstream 14875 true Chr1: 29818142-29833016 Arabidopsis thaliana
AT1G79280 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29818142-29819141 Arabidopsis thaliana
AT1G79280 2.0kb upstream 2.0kb upstream 15875 true Chr1: 29819142-29835016 Arabidopsis thaliana
AT1G79280 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29833017-29835016 Arabidopsis thaliana
AT1G79280 2.0kb downstream 2.0kb downstream 15875 true Chr1: 29817142-29833016 Arabidopsis thaliana
AT1G79280 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29817142-29819141 Arabidopsis thaliana
AT1G79280 5.0kb upstream 5.0kb upstream 18875 true Chr1: 29819142-29838016 Arabidopsis thaliana
AT1G79280 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29833017-29838016 Arabidopsis thaliana
AT1G79280 5.0kb downstream 5.0kb downstream 18875 true Chr1: 29814142-29833016 Arabidopsis thaliana
AT1G79280 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29814142-29819141 Arabidopsis thaliana
AT1G79280 10.0kb upstream 10.0kb upstream 23875 true Chr1: 29819142-29843016 Arabidopsis thaliana
AT1G79280 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29833017-29843016 Arabidopsis thaliana
AT1G79280 10.0kb downstream 10.0kb downstream 23875 true Chr1: 29809142-29833016 Arabidopsis thaliana
AT1G79280 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29809142-29819141 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372854 5261 Brassicaceae View MSA
123833469 5264 Brassicales-Malvales View MSA
124342180 5266 SBM View MSA
124242446 5268 Malvidae View MSA
124062490 5270 Rosid View MSA
123739915 5271 Pentapetalae View MSA
122787990 5272 Eudicot View MSA
122044649 5273 Angiosperm View MSA
121346894 5274 Embryophyte View MSA
123425304 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.281        
cufflinks 4.301        
cufflinks 2.501       Low
cufflinks 4.534        
cufflinks 2.457       Low
cufflinks 4.678        

0 Strain