Gene : EMB1135 A. thaliana TAIR10
Primary Identifier:  ? AT1G79350 Defline:  (1 of 1) PTHR12706:SF13 - RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING PROTEIN
Genomic Order:  6912 Name:  ? AT1G79350
Secondary Identifier:  ? PAC:19650669
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G79350 0.5kb upstream 0.5kb upstream 9282 true Chr1: 29844633-29853914 Arabidopsis thaliana
AT1G79350 0.5kb upstream 0.5kb upstream 500 false Chr1: 29853415-29853914 Arabidopsis thaliana
AT1G79350 0.5kb downstream 0.5kb downstream 9282 true Chr1: 29844133-29853414 Arabidopsis thaliana
AT1G79350 0.5kb downstream 0.5kb downstream 500 false Chr1: 29844133-29844632 Arabidopsis thaliana
AT1G79350 1.0kb upstream 1.0kb upstream 9782 true Chr1: 29844633-29854414 Arabidopsis thaliana
AT1G79350 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29853415-29854414 Arabidopsis thaliana
AT1G79350 1.0kb downstream 1.0kb downstream 9782 true Chr1: 29843633-29853414 Arabidopsis thaliana
AT1G79350 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29843633-29844632 Arabidopsis thaliana
AT1G79350 2.0kb upstream 2.0kb upstream 10782 true Chr1: 29844633-29855414 Arabidopsis thaliana
AT1G79350 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29853415-29855414 Arabidopsis thaliana
AT1G79350 2.0kb downstream 2.0kb downstream 10782 true Chr1: 29842633-29853414 Arabidopsis thaliana
AT1G79350 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29842633-29844632 Arabidopsis thaliana
AT1G79350 5.0kb upstream 5.0kb upstream 13782 true Chr1: 29844633-29858414 Arabidopsis thaliana
AT1G79350 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29853415-29858414 Arabidopsis thaliana
AT1G79350 5.0kb downstream 5.0kb downstream 13782 true Chr1: 29839633-29853414 Arabidopsis thaliana
AT1G79350 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29839633-29844632 Arabidopsis thaliana
AT1G79350 10.0kb upstream 10.0kb upstream 18782 true Chr1: 29844633-29863414 Arabidopsis thaliana
AT1G79350 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29853415-29863414 Arabidopsis thaliana
AT1G79350 10.0kb downstream 10.0kb downstream 18782 true Chr1: 29834633-29853414 Arabidopsis thaliana
AT1G79350 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29834633-29844632 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376620 5261 Brassicaceae View MSA
123829424 5264 Brassicales-Malvales View MSA
124347260 5266 SBM View MSA
124251905 5268 Malvidae View MSA
124065554 5270 Rosid View MSA
123742096 5271 Pentapetalae View MSA
122786510 5272 Eudicot View MSA
122045253 5273 Angiosperm View MSA
121344716 5274 Embryophyte View MSA
123424908 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.494        
cufflinks 7.737        
cufflinks 5.938        
cufflinks 8.703       High
cufflinks 5.828       Low
cufflinks 7.505        

0 Strain