Gene : AT1G79210 A. thaliana TAIR10
Defline:  (1 of 2) K02726 - 20S proteasome subunit alpha 2 (PSMA2) Genomic Order:  6901
Name:  ? AT1G79210 Secondary Identifier:  ? PAC:19650105
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G79210 0.5kb upstream 0.5kb upstream 3203 true Chr1: 29796081-29799283 Arabidopsis thaliana
AT1G79210 0.5kb upstream 0.5kb upstream 500 false Chr1: 29798784-29799283 Arabidopsis thaliana
AT1G79210 0.5kb downstream 0.5kb downstream 3203 true Chr1: 29795581-29798783 Arabidopsis thaliana
AT1G79210 0.5kb downstream 0.5kb downstream 500 false Chr1: 29795581-29796080 Arabidopsis thaliana
AT1G79210 1.0kb upstream 1.0kb upstream 3703 true Chr1: 29796081-29799783 Arabidopsis thaliana
AT1G79210 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29798784-29799783 Arabidopsis thaliana
AT1G79210 1.0kb downstream 1.0kb downstream 3703 true Chr1: 29795081-29798783 Arabidopsis thaliana
AT1G79210 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29795081-29796080 Arabidopsis thaliana
AT1G79210 2.0kb upstream 2.0kb upstream 4703 true Chr1: 29796081-29800783 Arabidopsis thaliana
AT1G79210 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29798784-29800783 Arabidopsis thaliana
AT1G79210 2.0kb downstream 2.0kb downstream 4703 true Chr1: 29794081-29798783 Arabidopsis thaliana
AT1G79210 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29794081-29796080 Arabidopsis thaliana
AT1G79210 5.0kb upstream 5.0kb upstream 7703 true Chr1: 29796081-29803783 Arabidopsis thaliana
AT1G79210 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29798784-29803783 Arabidopsis thaliana
AT1G79210 5.0kb downstream 5.0kb downstream 7703 true Chr1: 29791081-29798783 Arabidopsis thaliana
AT1G79210 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29791081-29796080 Arabidopsis thaliana
AT1G79210 10.0kb upstream 10.0kb upstream 12703 true Chr1: 29796081-29808783 Arabidopsis thaliana
AT1G79210 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29798784-29808783 Arabidopsis thaliana
AT1G79210 10.0kb downstream 10.0kb downstream 12703 true Chr1: 29786081-29798783 Arabidopsis thaliana
AT1G79210 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29786081-29796080 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026291 5273 Angiosperm View MSA
122376860 5261 Brassicaceae View MSA
123841015 5264 Brassicales-Malvales View MSA
124350463 5266 SBM View MSA
124241127 5268 Malvidae View MSA
124069190 5270 Rosid View MSA
123746972 5271 Pentapetalae View MSA
122795211 5272 Eudicot View MSA
121350421 5274 Embryophyte View MSA
123426464 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.191       High
cufflinks 5.708       Low
cufflinks 5.696       Low
cufflinks 5.956        
cufflinks 6.225       High
cufflinks 5.982        

0 Strain