Gene : AT1G79050 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22942//PTHR22942:SF37 - RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER // DNA REPAIR PROTEIN RECA HOMOLOG 1, CHLOROPLASTIC Genomic Order:  6886
Name:  ? AT1G79050 Secondary Identifier:  ? PAC:19651221
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G79050 0.5kb upstream 0.5kb upstream 3721 true Chr1: 29736959-29740679 Arabidopsis thaliana
AT1G79050 0.5kb upstream 0.5kb upstream 500 false Chr1: 29740180-29740679 Arabidopsis thaliana
AT1G79050 0.5kb downstream 0.5kb downstream 3721 true Chr1: 29736459-29740179 Arabidopsis thaliana
AT1G79050 0.5kb downstream 0.5kb downstream 500 false Chr1: 29736459-29736958 Arabidopsis thaliana
AT1G79050 1.0kb upstream 1.0kb upstream 4221 true Chr1: 29736959-29741179 Arabidopsis thaliana
AT1G79050 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29740180-29741179 Arabidopsis thaliana
AT1G79050 1.0kb downstream 1.0kb downstream 4221 true Chr1: 29735959-29740179 Arabidopsis thaliana
AT1G79050 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29735959-29736958 Arabidopsis thaliana
AT1G79050 2.0kb upstream 2.0kb upstream 5221 true Chr1: 29736959-29742179 Arabidopsis thaliana
AT1G79050 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29740180-29742179 Arabidopsis thaliana
AT1G79050 2.0kb downstream 2.0kb downstream 5221 true Chr1: 29734959-29740179 Arabidopsis thaliana
AT1G79050 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29734959-29736958 Arabidopsis thaliana
AT1G79050 5.0kb upstream 5.0kb upstream 8221 true Chr1: 29736959-29745179 Arabidopsis thaliana
AT1G79050 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29740180-29745179 Arabidopsis thaliana
AT1G79050 5.0kb downstream 5.0kb downstream 8221 true Chr1: 29731959-29740179 Arabidopsis thaliana
AT1G79050 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29731959-29736958 Arabidopsis thaliana
AT1G79050 10.0kb upstream 10.0kb upstream 13221 true Chr1: 29736959-29750179 Arabidopsis thaliana
AT1G79050 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29740180-29750179 Arabidopsis thaliana
AT1G79050 10.0kb downstream 10.0kb downstream 13221 true Chr1: 29726959-29740179 Arabidopsis thaliana
AT1G79050 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29726959-29736958 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371621 5261 Brassicaceae View MSA
123827416 5264 Brassicales-Malvales View MSA
124344535 5266 SBM View MSA
124238740 5268 Malvidae View MSA
124064590 5270 Rosid View MSA
123740564 5271 Pentapetalae View MSA
122789040 5272 Eudicot View MSA
122042524 5273 Angiosperm View MSA
121345028 5274 Embryophyte View MSA
123425276 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.206       High
cufflinks 2.783        
cufflinks 4.254        
cufflinks 2.588        
cufflinks 4.417        
cufflinks 2.64        

0 Strain