Gene : AT1G78950 A. thaliana TAIR10
Defline:  (1 of 1) K15813 - beta-amyrin synthase (LUP4) Genomic Order:  6874
Name:  ? AT1G78950 Secondary Identifier:  ? PAC:19653782
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G78950 0.5kb upstream 0.5kb upstream 4742 true Chr1: 29684432-29689173 Arabidopsis thaliana
AT1G78950 0.5kb upstream 0.5kb upstream 500 false Chr1: 29688674-29689173 Arabidopsis thaliana
AT1G78950 0.5kb downstream 0.5kb downstream 4742 true Chr1: 29683932-29688673 Arabidopsis thaliana
AT1G78950 0.5kb downstream 0.5kb downstream 500 false Chr1: 29683932-29684431 Arabidopsis thaliana
AT1G78950 1.0kb upstream 1.0kb upstream 5242 true Chr1: 29684432-29689673 Arabidopsis thaliana
AT1G78950 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29688674-29689673 Arabidopsis thaliana
AT1G78950 1.0kb downstream 1.0kb downstream 5242 true Chr1: 29683432-29688673 Arabidopsis thaliana
AT1G78950 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29683432-29684431 Arabidopsis thaliana
AT1G78950 2.0kb upstream 2.0kb upstream 6242 true Chr1: 29684432-29690673 Arabidopsis thaliana
AT1G78950 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29688674-29690673 Arabidopsis thaliana
AT1G78950 2.0kb downstream 2.0kb downstream 6242 true Chr1: 29682432-29688673 Arabidopsis thaliana
AT1G78950 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29682432-29684431 Arabidopsis thaliana
AT1G78950 5.0kb upstream 5.0kb upstream 9242 true Chr1: 29684432-29693673 Arabidopsis thaliana
AT1G78950 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29688674-29693673 Arabidopsis thaliana
AT1G78950 5.0kb downstream 5.0kb downstream 9242 true Chr1: 29679432-29688673 Arabidopsis thaliana
AT1G78950 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29679432-29684431 Arabidopsis thaliana
AT1G78950 10.0kb upstream 10.0kb upstream 14242 true Chr1: 29684432-29698673 Arabidopsis thaliana
AT1G78950 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29688674-29698673 Arabidopsis thaliana
AT1G78950 10.0kb downstream 10.0kb downstream 14242 true Chr1: 29674432-29688673 Arabidopsis thaliana
AT1G78950 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29674432-29684431 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791741 5273 Angiosperm View MSA
122331731 5261 Brassicaceae View MSA
123837659 5264 Brassicales-Malvales View MSA
124341185 5266 SBM View MSA
124240191 5268 Malvidae View MSA
124062069 5270 Rosid View MSA
123738080 5271 Pentapetalae View MSA
122788516 5272 Eudicot View MSA
121063041 5274 Embryophyte View MSA
123102827 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.175     Low  
cufflinks 0.201     Low  
cufflinks 0.169     Low  
cufflinks 0.383     Low  
cufflinks 0.221     Low  
cufflinks 0.496       High

0 Strain