Gene : AT1G79160 A. thaliana TAIR10
Defline:  (1 of 2) PTHR33177:SF6 - F3O9.30 Genomic Order:  6896
Name:  ? AT1G79160 Secondary Identifier:  ? PAC:19652524
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G79160 0.5kb upstream 0.5kb upstream 1553 true Chr1: 29779721-29781273 Arabidopsis thaliana
AT1G79160 0.5kb upstream 0.5kb upstream 500 false Chr1: 29780774-29781273 Arabidopsis thaliana
AT1G79160 0.5kb downstream 0.5kb downstream 1553 true Chr1: 29779221-29780773 Arabidopsis thaliana
AT1G79160 0.5kb downstream 0.5kb downstream 500 false Chr1: 29779221-29779720 Arabidopsis thaliana
AT1G79160 1.0kb upstream 1.0kb upstream 2053 true Chr1: 29779721-29781773 Arabidopsis thaliana
AT1G79160 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29780774-29781773 Arabidopsis thaliana
AT1G79160 1.0kb downstream 1.0kb downstream 2053 true Chr1: 29778721-29780773 Arabidopsis thaliana
AT1G79160 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29778721-29779720 Arabidopsis thaliana
AT1G79160 2.0kb upstream 2.0kb upstream 3053 true Chr1: 29779721-29782773 Arabidopsis thaliana
AT1G79160 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29780774-29782773 Arabidopsis thaliana
AT1G79160 2.0kb downstream 2.0kb downstream 3053 true Chr1: 29777721-29780773 Arabidopsis thaliana
AT1G79160 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29777721-29779720 Arabidopsis thaliana
AT1G79160 5.0kb upstream 5.0kb upstream 6053 true Chr1: 29779721-29785773 Arabidopsis thaliana
AT1G79160 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29780774-29785773 Arabidopsis thaliana
AT1G79160 5.0kb downstream 5.0kb downstream 6053 true Chr1: 29774721-29780773 Arabidopsis thaliana
AT1G79160 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29774721-29779720 Arabidopsis thaliana
AT1G79160 10.0kb upstream 10.0kb upstream 11053 true Chr1: 29779721-29790773 Arabidopsis thaliana
AT1G79160 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29780774-29790773 Arabidopsis thaliana
AT1G79160 10.0kb downstream 10.0kb downstream 11053 true Chr1: 29769721-29780773 Arabidopsis thaliana
AT1G79160 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29769721-29779720 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373635 5261 Brassicaceae View MSA
123835338 5264 Brassicales-Malvales View MSA
124349691 5266 SBM View MSA
124249979 5268 Malvidae View MSA
124061611 5270 Rosid View MSA
123748373 5271 Pentapetalae View MSA
122797765 5272 Eudicot View MSA
122050740 5273 Angiosperm View MSA
121350407 5274 Embryophyte View MSA
123381715 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.531       High
cufflinks 1.74       Low
cufflinks 3.876        
cufflinks 3.611        
cufflinks 3.637        
cufflinks 2.987        

0 Strain