Gene : AT1G78995 A. thaliana TAIR10
Genomic Order:  6880 Name:  ? AT1G78995
Secondary Identifier:  ? PAC:19652483
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G78995 0.5kb upstream 0.5kb upstream 1533 true Chr1: 29715079-29716611 Arabidopsis thaliana
AT1G78995 0.5kb upstream 0.5kb upstream 500 false Chr1: 29716112-29716611 Arabidopsis thaliana
AT1G78995 0.5kb downstream 0.5kb downstream 1533 true Chr1: 29714579-29716111 Arabidopsis thaliana
AT1G78995 0.5kb downstream 0.5kb downstream 500 false Chr1: 29714579-29715078 Arabidopsis thaliana
AT1G78995 1.0kb upstream 1.0kb upstream 2033 true Chr1: 29715079-29717111 Arabidopsis thaliana
AT1G78995 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29716112-29717111 Arabidopsis thaliana
AT1G78995 1.0kb downstream 1.0kb downstream 2033 true Chr1: 29714079-29716111 Arabidopsis thaliana
AT1G78995 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29714079-29715078 Arabidopsis thaliana
AT1G78995 2.0kb upstream 2.0kb upstream 3033 true Chr1: 29715079-29718111 Arabidopsis thaliana
AT1G78995 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29716112-29718111 Arabidopsis thaliana
AT1G78995 2.0kb downstream 2.0kb downstream 3033 true Chr1: 29713079-29716111 Arabidopsis thaliana
AT1G78995 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29713079-29715078 Arabidopsis thaliana
AT1G78995 5.0kb upstream 5.0kb upstream 6033 true Chr1: 29715079-29721111 Arabidopsis thaliana
AT1G78995 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29716112-29721111 Arabidopsis thaliana
AT1G78995 5.0kb downstream 5.0kb downstream 6033 true Chr1: 29710079-29716111 Arabidopsis thaliana
AT1G78995 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29710079-29715078 Arabidopsis thaliana
AT1G78995 10.0kb upstream 10.0kb upstream 11033 true Chr1: 29715079-29726111 Arabidopsis thaliana
AT1G78995 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29716112-29726111 Arabidopsis thaliana
AT1G78995 10.0kb downstream 10.0kb downstream 11033 true Chr1: 29705079-29716111 Arabidopsis thaliana
AT1G78995 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29705079-29715078 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364767 5261 Brassicaceae View MSA
123829297 5264 Brassicales-Malvales View MSA
124336668 5266 SBM View MSA
124239061 5268 Malvidae View MSA
124062606 5270 Rosid View MSA
123737613 5271 Pentapetalae View MSA
122786141 5272 Eudicot View MSA
122051130 5273 Angiosperm View MSA
121349570 5274 Embryophyte View MSA
123425322 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.424        
cufflinks 0.102     Low  
cufflinks 37.307     High High
cufflinks 0.134     Low  
cufflinks 24.146        
cufflinks 0.032     Low Low

0 Strain