Gene : SRF5 A. thaliana TAIR10
Primary Identifier:  ? AT1G78980 Defline:  (1 of 1) PTHR27001:SF233 - PROTEIN STRUBBELIG-RECEPTOR FAMILY 5
Genomic Order:  6878 Name:  ? AT1G78980
Secondary Identifier:  ? PAC:19650025
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G78980 0.5kb upstream 0.5kb upstream 4235 true Chr1: 29707687-29711921 Arabidopsis thaliana
AT1G78980 0.5kb upstream 0.5kb upstream 500 false Chr1: 29711422-29711921 Arabidopsis thaliana
AT1G78980 0.5kb downstream 0.5kb downstream 4235 true Chr1: 29707187-29711421 Arabidopsis thaliana
AT1G78980 0.5kb downstream 0.5kb downstream 500 false Chr1: 29707187-29707686 Arabidopsis thaliana
AT1G78980 1.0kb upstream 1.0kb upstream 4735 true Chr1: 29707687-29712421 Arabidopsis thaliana
AT1G78980 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29711422-29712421 Arabidopsis thaliana
AT1G78980 1.0kb downstream 1.0kb downstream 4735 true Chr1: 29706687-29711421 Arabidopsis thaliana
AT1G78980 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29706687-29707686 Arabidopsis thaliana
AT1G78980 2.0kb upstream 2.0kb upstream 5735 true Chr1: 29707687-29713421 Arabidopsis thaliana
AT1G78980 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29711422-29713421 Arabidopsis thaliana
AT1G78980 2.0kb downstream 2.0kb downstream 5735 true Chr1: 29705687-29711421 Arabidopsis thaliana
AT1G78980 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29705687-29707686 Arabidopsis thaliana
AT1G78980 5.0kb upstream 5.0kb upstream 8735 true Chr1: 29707687-29716421 Arabidopsis thaliana
AT1G78980 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29711422-29716421 Arabidopsis thaliana
AT1G78980 5.0kb downstream 5.0kb downstream 8735 true Chr1: 29702687-29711421 Arabidopsis thaliana
AT1G78980 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29702687-29707686 Arabidopsis thaliana
AT1G78980 10.0kb upstream 10.0kb upstream 13735 true Chr1: 29707687-29721421 Arabidopsis thaliana
AT1G78980 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29711422-29721421 Arabidopsis thaliana
AT1G78980 10.0kb downstream 10.0kb downstream 13735 true Chr1: 29697687-29711421 Arabidopsis thaliana
AT1G78980 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29697687-29707686 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361977 5261 Brassicaceae View MSA
123838080 5264 Brassicales-Malvales View MSA
124322394 5266 SBM View MSA
124239606 5268 Malvidae View MSA
124050134 5270 Rosid View MSA
123741123 5271 Pentapetalae View MSA
122787380 5272 Eudicot View MSA
122050311 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348233 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low  

0 Strain