Gene : emb1473 A. thaliana TAIR10
Primary Identifier:  ? AT1G78630 Defline:  (1 of 1) PTHR11545:SF7 - 50S RIBOSOMAL PROTEIN L13, CHLOROPLASTIC
Genomic Order:  6837 Name:  ? AT1G78630
Secondary Identifier:  ? PAC:19649971
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G78630 0.5kb upstream 0.5kb upstream 2203 true Chr1: 29575456-29577658 Arabidopsis thaliana
AT1G78630 0.5kb upstream 0.5kb upstream 500 false Chr1: 29575456-29575955 Arabidopsis thaliana
AT1G78630 0.5kb downstream 0.5kb downstream 2203 true Chr1: 29575956-29578158 Arabidopsis thaliana
AT1G78630 0.5kb downstream 0.5kb downstream 500 false Chr1: 29577659-29578158 Arabidopsis thaliana
AT1G78630 1.0kb upstream 1.0kb upstream 2703 true Chr1: 29574956-29577658 Arabidopsis thaliana
AT1G78630 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29574956-29575955 Arabidopsis thaliana
AT1G78630 1.0kb downstream 1.0kb downstream 2703 true Chr1: 29575956-29578658 Arabidopsis thaliana
AT1G78630 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29577659-29578658 Arabidopsis thaliana
AT1G78630 2.0kb upstream 2.0kb upstream 3703 true Chr1: 29573956-29577658 Arabidopsis thaliana
AT1G78630 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29573956-29575955 Arabidopsis thaliana
AT1G78630 2.0kb downstream 2.0kb downstream 3703 true Chr1: 29575956-29579658 Arabidopsis thaliana
AT1G78630 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29577659-29579658 Arabidopsis thaliana
AT1G78630 5.0kb upstream 5.0kb upstream 6703 true Chr1: 29570956-29577658 Arabidopsis thaliana
AT1G78630 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29570956-29575955 Arabidopsis thaliana
AT1G78630 5.0kb downstream 5.0kb downstream 6703 true Chr1: 29575956-29582658 Arabidopsis thaliana
AT1G78630 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29577659-29582658 Arabidopsis thaliana
AT1G78630 10.0kb upstream 10.0kb upstream 11703 true Chr1: 29565956-29577658 Arabidopsis thaliana
AT1G78630 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29565956-29575955 Arabidopsis thaliana
AT1G78630 10.0kb downstream 10.0kb downstream 11703 true Chr1: 29575956-29587658 Arabidopsis thaliana
AT1G78630 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29577659-29587658 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364624 5261 Brassicaceae View MSA
123841023 5264 Brassicales-Malvales View MSA
124340887 5266 SBM View MSA
124242655 5268 Malvidae View MSA
124064929 5270 Rosid View MSA
123742775 5271 Pentapetalae View MSA
122786889 5272 Eudicot View MSA
122046180 5273 Angiosperm View MSA
121346558 5274 Embryophyte View MSA
123428776 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 221.792     High  
cufflinks 14.874        
cufflinks 254.316     High  
cufflinks 14.472        
cufflinks 196.235     High  
cufflinks 11.917       Low

0 Strain