Gene : AT1G78180 A. thaliana TAIR10
Defline:  (1 of 1) PTHR24089//PTHR24089:SF292 - FAMILY NOT NAMED // MITOCHONDRIAL ADENINE NUCLEOTIDE TRANSPORTER BTL2-RELATED Genomic Order:  6794
Name:  ? AT1G78180 Secondary Identifier:  ? PAC:19649535
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G78180 0.5kb upstream 0.5kb upstream 2228 true Chr1: 29416413-29418640 Arabidopsis thaliana
AT1G78180 0.5kb upstream 0.5kb upstream 500 false Chr1: 29416413-29416912 Arabidopsis thaliana
AT1G78180 0.5kb downstream 0.5kb downstream 2228 true Chr1: 29416913-29419140 Arabidopsis thaliana
AT1G78180 0.5kb downstream 0.5kb downstream 500 false Chr1: 29418641-29419140 Arabidopsis thaliana
AT1G78180 1.0kb upstream 1.0kb upstream 2728 true Chr1: 29415913-29418640 Arabidopsis thaliana
AT1G78180 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29415913-29416912 Arabidopsis thaliana
AT1G78180 1.0kb downstream 1.0kb downstream 2728 true Chr1: 29416913-29419640 Arabidopsis thaliana
AT1G78180 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29418641-29419640 Arabidopsis thaliana
AT1G78180 2.0kb upstream 2.0kb upstream 3728 true Chr1: 29414913-29418640 Arabidopsis thaliana
AT1G78180 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29414913-29416912 Arabidopsis thaliana
AT1G78180 2.0kb downstream 2.0kb downstream 3728 true Chr1: 29416913-29420640 Arabidopsis thaliana
AT1G78180 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29418641-29420640 Arabidopsis thaliana
AT1G78180 5.0kb upstream 5.0kb upstream 6728 true Chr1: 29411913-29418640 Arabidopsis thaliana
AT1G78180 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29411913-29416912 Arabidopsis thaliana
AT1G78180 5.0kb downstream 5.0kb downstream 6728 true Chr1: 29416913-29423640 Arabidopsis thaliana
AT1G78180 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29418641-29423640 Arabidopsis thaliana
AT1G78180 10.0kb upstream 10.0kb upstream 11728 true Chr1: 29406913-29418640 Arabidopsis thaliana
AT1G78180 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29406913-29416912 Arabidopsis thaliana
AT1G78180 10.0kb downstream 10.0kb downstream 11728 true Chr1: 29416913-29428640 Arabidopsis thaliana
AT1G78180 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29418641-29428640 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368778 5261 Brassicaceae View MSA
123838692 5264 Brassicales-Malvales View MSA
124348235 5266 SBM View MSA
124237614 5268 Malvidae View MSA
124074944 5270 Rosid View MSA
123744328 5271 Pentapetalae View MSA
122788638 5272 Eudicot View MSA
122051184 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121312333 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.986        
cufflinks 2.141        
cufflinks 9.081       High
cufflinks 2.285        
cufflinks 5.842        
cufflinks 2.34        

0 Strain