Gene : AT1G78210 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10992//PTHR10992:SF837 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  6797
Name:  ? AT1G78210 Secondary Identifier:  ? PAC:19650883
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana LIPAS-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-7420 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G78210 0.5kb upstream 0.5kb upstream 2160 true Chr1: 29422716-29424875 Arabidopsis thaliana
AT1G78210 0.5kb upstream 0.5kb upstream 500 false Chr1: 29424376-29424875 Arabidopsis thaliana
AT1G78210 0.5kb downstream 0.5kb downstream 2160 true Chr1: 29422216-29424375 Arabidopsis thaliana
AT1G78210 0.5kb downstream 0.5kb downstream 500 false Chr1: 29422216-29422715 Arabidopsis thaliana
AT1G78210 1.0kb upstream 1.0kb upstream 2660 true Chr1: 29422716-29425375 Arabidopsis thaliana
AT1G78210 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29424376-29425375 Arabidopsis thaliana
AT1G78210 1.0kb downstream 1.0kb downstream 2660 true Chr1: 29421716-29424375 Arabidopsis thaliana
AT1G78210 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29421716-29422715 Arabidopsis thaliana
AT1G78210 2.0kb upstream 2.0kb upstream 3660 true Chr1: 29422716-29426375 Arabidopsis thaliana
AT1G78210 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29424376-29426375 Arabidopsis thaliana
AT1G78210 2.0kb downstream 2.0kb downstream 3660 true Chr1: 29420716-29424375 Arabidopsis thaliana
AT1G78210 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29420716-29422715 Arabidopsis thaliana
AT1G78210 5.0kb upstream 5.0kb upstream 6660 true Chr1: 29422716-29429375 Arabidopsis thaliana
AT1G78210 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29424376-29429375 Arabidopsis thaliana
AT1G78210 5.0kb downstream 5.0kb downstream 6660 true Chr1: 29417716-29424375 Arabidopsis thaliana
AT1G78210 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29417716-29422715 Arabidopsis thaliana
AT1G78210 10.0kb upstream 10.0kb upstream 11660 true Chr1: 29422716-29434375 Arabidopsis thaliana
AT1G78210 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29424376-29434375 Arabidopsis thaliana
AT1G78210 10.0kb downstream 10.0kb downstream 11660 true Chr1: 29412716-29424375 Arabidopsis thaliana
AT1G78210 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29412716-29422715 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376174 5261 Brassicaceae View MSA
123838606 5264 Brassicales-Malvales View MSA
124349215 5266 SBM View MSA
124244358 5268 Malvidae View MSA
124070753 5270 Rosid View MSA
123749753 5271 Pentapetalae View MSA
122790165 5272 Eudicot View MSA
122050369 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.633       High
cufflinks 11.034        
cufflinks 9.948        
cufflinks 8.889       Low
cufflinks 11.841        
cufflinks 9.582        

0 Strain