Gene : AT1G77600 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12663:SF7 - ARM REPEAT SUPERFAMILY PROTEIN Genomic Order:  6730
Name:  ? AT1G77600 Secondary Identifier:  ? PAC:19652250
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G77600 0.5kb upstream 0.5kb upstream 10201 true Chr1: 29152748-29162948 Arabidopsis thaliana
AT1G77600 0.5kb upstream 0.5kb upstream 500 false Chr1: 29162449-29162948 Arabidopsis thaliana
AT1G77600 0.5kb downstream 0.5kb downstream 10201 true Chr1: 29152248-29162448 Arabidopsis thaliana
AT1G77600 0.5kb downstream 0.5kb downstream 500 false Chr1: 29152248-29152747 Arabidopsis thaliana
AT1G77600 1.0kb upstream 1.0kb upstream 10701 true Chr1: 29152748-29163448 Arabidopsis thaliana
AT1G77600 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29162449-29163448 Arabidopsis thaliana
AT1G77600 1.0kb downstream 1.0kb downstream 10701 true Chr1: 29151748-29162448 Arabidopsis thaliana
AT1G77600 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29151748-29152747 Arabidopsis thaliana
AT1G77600 2.0kb upstream 2.0kb upstream 11701 true Chr1: 29152748-29164448 Arabidopsis thaliana
AT1G77600 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29162449-29164448 Arabidopsis thaliana
AT1G77600 2.0kb downstream 2.0kb downstream 11701 true Chr1: 29150748-29162448 Arabidopsis thaliana
AT1G77600 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29150748-29152747 Arabidopsis thaliana
AT1G77600 5.0kb upstream 5.0kb upstream 14701 true Chr1: 29152748-29167448 Arabidopsis thaliana
AT1G77600 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29162449-29167448 Arabidopsis thaliana
AT1G77600 5.0kb downstream 5.0kb downstream 14701 true Chr1: 29147748-29162448 Arabidopsis thaliana
AT1G77600 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29147748-29152747 Arabidopsis thaliana
AT1G77600 10.0kb upstream 10.0kb upstream 19701 true Chr1: 29152748-29172448 Arabidopsis thaliana
AT1G77600 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29162449-29172448 Arabidopsis thaliana
AT1G77600 10.0kb downstream 10.0kb downstream 19701 true Chr1: 29142748-29162448 Arabidopsis thaliana
AT1G77600 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29142748-29152747 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367060 5261 Brassicaceae View MSA
123831363 5264 Brassicales-Malvales View MSA
124321724 5266 SBM View MSA
124242092 5268 Malvidae View MSA
124050422 5270 Rosid View MSA
123747743 5271 Pentapetalae View MSA
122792250 5272 Eudicot View MSA
122042349 5273 Angiosperm View MSA
121309949 5274 Embryophyte View MSA
123426721 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.194        
cufflinks 1.223        
cufflinks 1.235       High
cufflinks 1.1       Low
cufflinks 1.161        
cufflinks 1.111       Low

0 Strain