Gene : AT1G77500 A. thaliana TAIR10
Defline:  (1 of 2) PTHR21450//PTHR21450:SF8 - UNCHARACTERIZED // F8K7.18 PROTEIN Genomic Order:  6720
Name:  ? AT1G77500 Secondary Identifier:  ? PAC:19650478
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G77500 0.5kb upstream 0.5kb upstream 4203 true Chr1: 29120989-29125191 Arabidopsis thaliana
AT1G77500 0.5kb upstream 0.5kb upstream 500 false Chr1: 29120989-29121488 Arabidopsis thaliana
AT1G77500 0.5kb downstream 0.5kb downstream 4203 true Chr1: 29121489-29125691 Arabidopsis thaliana
AT1G77500 0.5kb downstream 0.5kb downstream 500 false Chr1: 29125192-29125691 Arabidopsis thaliana
AT1G77500 1.0kb upstream 1.0kb upstream 4703 true Chr1: 29120489-29125191 Arabidopsis thaliana
AT1G77500 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29120489-29121488 Arabidopsis thaliana
AT1G77500 1.0kb downstream 1.0kb downstream 4703 true Chr1: 29121489-29126191 Arabidopsis thaliana
AT1G77500 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29125192-29126191 Arabidopsis thaliana
AT1G77500 2.0kb upstream 2.0kb upstream 5703 true Chr1: 29119489-29125191 Arabidopsis thaliana
AT1G77500 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29119489-29121488 Arabidopsis thaliana
AT1G77500 2.0kb downstream 2.0kb downstream 5703 true Chr1: 29121489-29127191 Arabidopsis thaliana
AT1G77500 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29125192-29127191 Arabidopsis thaliana
AT1G77500 5.0kb upstream 5.0kb upstream 8703 true Chr1: 29116489-29125191 Arabidopsis thaliana
AT1G77500 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29116489-29121488 Arabidopsis thaliana
AT1G77500 5.0kb downstream 5.0kb downstream 8703 true Chr1: 29121489-29130191 Arabidopsis thaliana
AT1G77500 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29125192-29130191 Arabidopsis thaliana
AT1G77500 10.0kb upstream 10.0kb upstream 13703 true Chr1: 29111489-29125191 Arabidopsis thaliana
AT1G77500 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29111489-29121488 Arabidopsis thaliana
AT1G77500 10.0kb downstream 10.0kb downstream 13703 true Chr1: 29121489-29135191 Arabidopsis thaliana
AT1G77500 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29125192-29135191 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375622 5261 Brassicaceae View MSA
123801005 5264 Brassicales-Malvales View MSA
124298352 5266 SBM View MSA
124150013 5268 Malvidae View MSA
124066294 5270 Rosid View MSA
123744998 5271 Pentapetalae View MSA
122791798 5272 Eudicot View MSA
122049285 5273 Angiosperm View MSA
121350303 5274 Embryophyte View MSA
123381668 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.24        
cufflinks 6.769        
cufflinks 4.654       Low
cufflinks 8.213       High
cufflinks 5.406        
cufflinks 6.587        

0 Strain