Gene : AT1G77400 A. thaliana TAIR10
Defline:  (1 of 14) PF05097 - Protein of unknown function (DUF688) (DUF688) Genomic Order:  6710
Name:  ? AT1G77400 Secondary Identifier:  ? PAC:19655421
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G77400 0.5kb upstream 0.5kb upstream 1554 true Chr1: 29085311-29086864 Arabidopsis thaliana
AT1G77400 0.5kb upstream 0.5kb upstream 500 false Chr1: 29085311-29085810 Arabidopsis thaliana
AT1G77400 0.5kb downstream 0.5kb downstream 1554 true Chr1: 29085811-29087364 Arabidopsis thaliana
AT1G77400 0.5kb downstream 0.5kb downstream 500 false Chr1: 29086865-29087364 Arabidopsis thaliana
AT1G77400 1.0kb upstream 1.0kb upstream 2054 true Chr1: 29084811-29086864 Arabidopsis thaliana
AT1G77400 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29084811-29085810 Arabidopsis thaliana
AT1G77400 1.0kb downstream 1.0kb downstream 2054 true Chr1: 29085811-29087864 Arabidopsis thaliana
AT1G77400 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29086865-29087864 Arabidopsis thaliana
AT1G77400 2.0kb upstream 2.0kb upstream 3054 true Chr1: 29083811-29086864 Arabidopsis thaliana
AT1G77400 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29083811-29085810 Arabidopsis thaliana
AT1G77400 2.0kb downstream 2.0kb downstream 3054 true Chr1: 29085811-29088864 Arabidopsis thaliana
AT1G77400 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29086865-29088864 Arabidopsis thaliana
AT1G77400 5.0kb upstream 5.0kb upstream 6054 true Chr1: 29080811-29086864 Arabidopsis thaliana
AT1G77400 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29080811-29085810 Arabidopsis thaliana
AT1G77400 5.0kb downstream 5.0kb downstream 6054 true Chr1: 29085811-29091864 Arabidopsis thaliana
AT1G77400 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29086865-29091864 Arabidopsis thaliana
AT1G77400 10.0kb upstream 10.0kb upstream 11054 true Chr1: 29075811-29086864 Arabidopsis thaliana
AT1G77400 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29075811-29085810 Arabidopsis thaliana
AT1G77400 10.0kb downstream 10.0kb downstream 11054 true Chr1: 29085811-29096864 Arabidopsis thaliana
AT1G77400 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29086865-29096864 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027912 5273 Angiosperm View MSA
122372917 5261 Brassicaceae View MSA
123837851 5264 Brassicales-Malvales View MSA
124342517 5266 SBM View MSA
124250975 5268 Malvidae View MSA
124070651 5270 Rosid View MSA
123740307 5271 Pentapetalae View MSA
122795791 5272 Eudicot View MSA
121297488 5274 Embryophyte View MSA
123335540 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.46        
cufflinks 8.41        
cufflinks 1.457        
cufflinks 9.534        
cufflinks 0.992       Low
cufflinks 12.849       High

0 Strain