Gene : AT1G77200 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31985:SF23 - DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-RELATED Genomic Order:  6690
Name:  ? AT1G77200 Secondary Identifier:  ? PAC:19650836
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G77200 0.5kb upstream 0.5kb upstream 1235 true Chr1: 29004357-29005591 Arabidopsis thaliana
AT1G77200 0.5kb upstream 0.5kb upstream 500 false Chr1: 29005092-29005591 Arabidopsis thaliana
AT1G77200 0.5kb downstream 0.5kb downstream 1235 true Chr1: 29003857-29005091 Arabidopsis thaliana
AT1G77200 0.5kb downstream 0.5kb downstream 500 false Chr1: 29003857-29004356 Arabidopsis thaliana
AT1G77200 1.0kb upstream 1.0kb upstream 1735 true Chr1: 29004357-29006091 Arabidopsis thaliana
AT1G77200 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29005092-29006091 Arabidopsis thaliana
AT1G77200 1.0kb downstream 1.0kb downstream 1735 true Chr1: 29003357-29005091 Arabidopsis thaliana
AT1G77200 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29003357-29004356 Arabidopsis thaliana
AT1G77200 2.0kb upstream 2.0kb upstream 2735 true Chr1: 29004357-29007091 Arabidopsis thaliana
AT1G77200 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29005092-29007091 Arabidopsis thaliana
AT1G77200 2.0kb downstream 2.0kb downstream 2735 true Chr1: 29002357-29005091 Arabidopsis thaliana
AT1G77200 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29002357-29004356 Arabidopsis thaliana
AT1G77200 5.0kb upstream 5.0kb upstream 5735 true Chr1: 29004357-29010091 Arabidopsis thaliana
AT1G77200 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29005092-29010091 Arabidopsis thaliana
AT1G77200 5.0kb downstream 5.0kb downstream 5735 true Chr1: 28999357-29005091 Arabidopsis thaliana
AT1G77200 5.0kb downstream 5.0kb downstream 5000 false Chr1: 28999357-29004356 Arabidopsis thaliana
AT1G77200 10.0kb upstream 10.0kb upstream 10735 true Chr1: 29004357-29015091 Arabidopsis thaliana
AT1G77200 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29005092-29015091 Arabidopsis thaliana
AT1G77200 10.0kb downstream 10.0kb downstream 10735 true Chr1: 28994357-29005091 Arabidopsis thaliana
AT1G77200 10.0kb downstream 10.0kb downstream 10000 false Chr1: 28994357-29004356 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371393 5261 Brassicaceae View MSA
123840125 5264 Brassicales-Malvales View MSA
124350818 5266 SBM View MSA
124245098 5268 Malvidae View MSA
124069565 5270 Rosid View MSA
123746579 5271 Pentapetalae View MSA
122788130 5272 Eudicot View MSA
122049485 5273 Angiosperm View MSA
121351578 5274 Embryophyte View MSA
123382234 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.336        
cufflinks 0.312     Low  
cufflinks 0.334        
cufflinks 0.686        
cufflinks 0.578        
cufflinks 1.133       High

0 Strain