Gene : TLP1 A. thaliana TAIR10
Primary Identifier:  ? AT1G76900 Defline:  (1 of 3) PTHR16517//PTHR16517:SF31 - TUBBY-RELATED // TUBBY-LIKE F-BOX PROTEIN 1-RELATED
Genomic Order:  6656 Name:  ? AT1G76900
Secondary Identifier:  ? PAC:19653897
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G76900 0.5kb upstream 0.5kb upstream 3253 true Chr1: 28881314-28884566 Arabidopsis thaliana
AT1G76900 0.5kb upstream 0.5kb upstream 500 false Chr1: 28881314-28881813 Arabidopsis thaliana
AT1G76900 0.5kb downstream 0.5kb downstream 3253 true Chr1: 28881814-28885066 Arabidopsis thaliana
AT1G76900 0.5kb downstream 0.5kb downstream 500 false Chr1: 28884567-28885066 Arabidopsis thaliana
AT1G76900 1.0kb upstream 1.0kb upstream 3753 true Chr1: 28880814-28884566 Arabidopsis thaliana
AT1G76900 1.0kb upstream 1.0kb upstream 1000 false Chr1: 28880814-28881813 Arabidopsis thaliana
AT1G76900 1.0kb downstream 1.0kb downstream 3753 true Chr1: 28881814-28885566 Arabidopsis thaliana
AT1G76900 1.0kb downstream 1.0kb downstream 1000 false Chr1: 28884567-28885566 Arabidopsis thaliana
AT1G76900 2.0kb upstream 2.0kb upstream 4753 true Chr1: 28879814-28884566 Arabidopsis thaliana
AT1G76900 2.0kb upstream 2.0kb upstream 2000 false Chr1: 28879814-28881813 Arabidopsis thaliana
AT1G76900 2.0kb downstream 2.0kb downstream 4753 true Chr1: 28881814-28886566 Arabidopsis thaliana
AT1G76900 2.0kb downstream 2.0kb downstream 2000 false Chr1: 28884567-28886566 Arabidopsis thaliana
AT1G76900 5.0kb upstream 5.0kb upstream 7753 true Chr1: 28876814-28884566 Arabidopsis thaliana
AT1G76900 5.0kb upstream 5.0kb upstream 5000 false Chr1: 28876814-28881813 Arabidopsis thaliana
AT1G76900 5.0kb downstream 5.0kb downstream 7753 true Chr1: 28881814-28889566 Arabidopsis thaliana
AT1G76900 5.0kb downstream 5.0kb downstream 5000 false Chr1: 28884567-28889566 Arabidopsis thaliana
AT1G76900 10.0kb upstream 10.0kb upstream 12753 true Chr1: 28871814-28884566 Arabidopsis thaliana
AT1G76900 10.0kb upstream 10.0kb upstream 10000 false Chr1: 28871814-28881813 Arabidopsis thaliana
AT1G76900 10.0kb downstream 10.0kb downstream 12753 true Chr1: 28881814-28894566 Arabidopsis thaliana
AT1G76900 10.0kb downstream 10.0kb downstream 10000 false Chr1: 28884567-28894566 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363575 5261 Brassicaceae View MSA
123839710 5264 Brassicales-Malvales View MSA
124339336 5266 SBM View MSA
124250508 5268 Malvidae View MSA
124068448 5270 Rosid View MSA
123743171 5271 Pentapetalae View MSA
122786446 5272 Eudicot View MSA
122044327 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121348967 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.94        
cufflinks 13.498       High
cufflinks 6.456       Low
cufflinks 12.306        
cufflinks 7.959        
cufflinks 12.473        

0 Strain