Gene : SEC5A A. thaliana TAIR10
Primary Identifier:  ? AT1G76850 Defline:  (1 of 2) K17637 - exocyst complex component 2 (EXOC2, SEC5)
Genomic Order:  6651 Name:  ? AT1G76850
Secondary Identifier:  ? PAC:19649872
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G76850 0.5kb upstream 0.5kb upstream 7049 true Chr1: 28847451-28854499 Arabidopsis thaliana
AT1G76850 0.5kb upstream 0.5kb upstream 500 false Chr1: 28847451-28847950 Arabidopsis thaliana
AT1G76850 0.5kb downstream 0.5kb downstream 7049 true Chr1: 28847951-28854999 Arabidopsis thaliana
AT1G76850 0.5kb downstream 0.5kb downstream 500 false Chr1: 28854500-28854999 Arabidopsis thaliana
AT1G76850 1.0kb upstream 1.0kb upstream 7549 true Chr1: 28846951-28854499 Arabidopsis thaliana
AT1G76850 1.0kb upstream 1.0kb upstream 1000 false Chr1: 28846951-28847950 Arabidopsis thaliana
AT1G76850 1.0kb downstream 1.0kb downstream 7549 true Chr1: 28847951-28855499 Arabidopsis thaliana
AT1G76850 1.0kb downstream 1.0kb downstream 1000 false Chr1: 28854500-28855499 Arabidopsis thaliana
AT1G76850 2.0kb upstream 2.0kb upstream 8549 true Chr1: 28845951-28854499 Arabidopsis thaliana
AT1G76850 2.0kb upstream 2.0kb upstream 2000 false Chr1: 28845951-28847950 Arabidopsis thaliana
AT1G76850 2.0kb downstream 2.0kb downstream 8549 true Chr1: 28847951-28856499 Arabidopsis thaliana
AT1G76850 2.0kb downstream 2.0kb downstream 2000 false Chr1: 28854500-28856499 Arabidopsis thaliana
AT1G76850 5.0kb upstream 5.0kb upstream 11549 true Chr1: 28842951-28854499 Arabidopsis thaliana
AT1G76850 5.0kb upstream 5.0kb upstream 5000 false Chr1: 28842951-28847950 Arabidopsis thaliana
AT1G76850 5.0kb downstream 5.0kb downstream 11549 true Chr1: 28847951-28859499 Arabidopsis thaliana
AT1G76850 5.0kb downstream 5.0kb downstream 5000 false Chr1: 28854500-28859499 Arabidopsis thaliana
AT1G76850 10.0kb upstream 10.0kb upstream 16549 true Chr1: 28837951-28854499 Arabidopsis thaliana
AT1G76850 10.0kb upstream 10.0kb upstream 10000 false Chr1: 28837951-28847950 Arabidopsis thaliana
AT1G76850 10.0kb downstream 10.0kb downstream 16549 true Chr1: 28847951-28864499 Arabidopsis thaliana
AT1G76850 10.0kb downstream 10.0kb downstream 10000 false Chr1: 28854500-28864499 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377945 5261 Brassicaceae View MSA
123833280 5264 Brassicales-Malvales View MSA
124340071 5266 SBM View MSA
124244227 5268 Malvidae View MSA
124062165 5270 Rosid View MSA
123739212 5271 Pentapetalae View MSA
122789529 5272 Eudicot View MSA
122043231 5273 Angiosperm View MSA
121349078 5274 Embryophyte View MSA
123426915 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.724        
cufflinks 18.692        
cufflinks 13.876       Low
cufflinks 19.927       High
cufflinks 14.316       Low
cufflinks 19.595        

0 Strain