Gene : AT1G76800 A. thaliana TAIR10
Defline:  (1 of 6) KOG4473 - Uncharacterized membrane protein Genomic Order:  6646
Name:  ? AT1G76800 Secondary Identifier:  ? PAC:19652390
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G76800 0.5kb upstream 0.5kb upstream 1470 true Chr1: 28828808-28830277 Arabidopsis thaliana
AT1G76800 0.5kb upstream 0.5kb upstream 500 false Chr1: 28828808-28829307 Arabidopsis thaliana
AT1G76800 0.5kb downstream 0.5kb downstream 1470 true Chr1: 28829308-28830777 Arabidopsis thaliana
AT1G76800 0.5kb downstream 0.5kb downstream 500 false Chr1: 28830278-28830777 Arabidopsis thaliana
AT1G76800 1.0kb upstream 1.0kb upstream 1970 true Chr1: 28828308-28830277 Arabidopsis thaliana
AT1G76800 1.0kb upstream 1.0kb upstream 1000 false Chr1: 28828308-28829307 Arabidopsis thaliana
AT1G76800 1.0kb downstream 1.0kb downstream 1970 true Chr1: 28829308-28831277 Arabidopsis thaliana
AT1G76800 1.0kb downstream 1.0kb downstream 1000 false Chr1: 28830278-28831277 Arabidopsis thaliana
AT1G76800 2.0kb upstream 2.0kb upstream 2970 true Chr1: 28827308-28830277 Arabidopsis thaliana
AT1G76800 2.0kb upstream 2.0kb upstream 2000 false Chr1: 28827308-28829307 Arabidopsis thaliana
AT1G76800 2.0kb downstream 2.0kb downstream 2970 true Chr1: 28829308-28832277 Arabidopsis thaliana
AT1G76800 2.0kb downstream 2.0kb downstream 2000 false Chr1: 28830278-28832277 Arabidopsis thaliana
AT1G76800 5.0kb upstream 5.0kb upstream 5970 true Chr1: 28824308-28830277 Arabidopsis thaliana
AT1G76800 5.0kb upstream 5.0kb upstream 5000 false Chr1: 28824308-28829307 Arabidopsis thaliana
AT1G76800 5.0kb downstream 5.0kb downstream 5970 true Chr1: 28829308-28835277 Arabidopsis thaliana
AT1G76800 5.0kb downstream 5.0kb downstream 5000 false Chr1: 28830278-28835277 Arabidopsis thaliana
AT1G76800 10.0kb upstream 10.0kb upstream 10970 true Chr1: 28819308-28830277 Arabidopsis thaliana
AT1G76800 10.0kb upstream 10.0kb upstream 10000 false Chr1: 28819308-28829307 Arabidopsis thaliana
AT1G76800 10.0kb downstream 10.0kb downstream 10970 true Chr1: 28829308-28840277 Arabidopsis thaliana
AT1G76800 10.0kb downstream 10.0kb downstream 10000 false Chr1: 28830278-28840277 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361792 5261 Brassicaceae View MSA
123798245 5264 Brassicales-Malvales View MSA
124295912 5266 SBM View MSA
124148218 5268 Malvidae View MSA
124067576 5270 Rosid View MSA
123753376 5271 Pentapetalae View MSA
122797490 5272 Eudicot View MSA
122043714 5273 Angiosperm View MSA
121351711 5274 Embryophyte View MSA
123428360 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.017       High
cufflinks 2.17        
cufflinks 2.208        
cufflinks 1.654       Low
cufflinks 2.108        
cufflinks 2.085        

0 Strain