Gene : CKX5 A. thaliana TAIR10
Primary Identifier:  ? AT1G75450 Defline:  (1 of 1) PTHR13878:SF60 - CYTOKININ DEHYDROGENASE 5
Genomic Order:  6513 Name:  ? AT1G75450
Secondary Identifier:  ? PAC:19653979
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Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G75450 0.5kb upstream 0.5kb upstream 4418 true Chr1: 28314458-28318875 Arabidopsis thaliana
AT1G75450 0.5kb upstream 0.5kb upstream 500 false Chr1: 28318376-28318875 Arabidopsis thaliana
AT1G75450 0.5kb downstream 0.5kb downstream 4418 true Chr1: 28313958-28318375 Arabidopsis thaliana
AT1G75450 0.5kb downstream 0.5kb downstream 500 false Chr1: 28313958-28314457 Arabidopsis thaliana
AT1G75450 1.0kb upstream 1.0kb upstream 4918 true Chr1: 28314458-28319375 Arabidopsis thaliana
AT1G75450 1.0kb upstream 1.0kb upstream 1000 false Chr1: 28318376-28319375 Arabidopsis thaliana
AT1G75450 1.0kb downstream 1.0kb downstream 4918 true Chr1: 28313458-28318375 Arabidopsis thaliana
AT1G75450 1.0kb downstream 1.0kb downstream 1000 false Chr1: 28313458-28314457 Arabidopsis thaliana
AT1G75450 2.0kb upstream 2.0kb upstream 5918 true Chr1: 28314458-28320375 Arabidopsis thaliana
AT1G75450 2.0kb upstream 2.0kb upstream 2000 false Chr1: 28318376-28320375 Arabidopsis thaliana
AT1G75450 2.0kb downstream 2.0kb downstream 5918 true Chr1: 28312458-28318375 Arabidopsis thaliana
AT1G75450 2.0kb downstream 2.0kb downstream 2000 false Chr1: 28312458-28314457 Arabidopsis thaliana
AT1G75450 5.0kb upstream 5.0kb upstream 8918 true Chr1: 28314458-28323375 Arabidopsis thaliana
AT1G75450 5.0kb upstream 5.0kb upstream 5000 false Chr1: 28318376-28323375 Arabidopsis thaliana
AT1G75450 5.0kb downstream 5.0kb downstream 8918 true Chr1: 28309458-28318375 Arabidopsis thaliana
AT1G75450 5.0kb downstream 5.0kb downstream 5000 false Chr1: 28309458-28314457 Arabidopsis thaliana
AT1G75450 10.0kb upstream 10.0kb upstream 13918 true Chr1: 28314458-28328375 Arabidopsis thaliana
AT1G75450 10.0kb upstream 10.0kb upstream 10000 false Chr1: 28318376-28328375 Arabidopsis thaliana
AT1G75450 10.0kb downstream 10.0kb downstream 13918 true Chr1: 28304458-28318375 Arabidopsis thaliana
AT1G75450 10.0kb downstream 10.0kb downstream 10000 false Chr1: 28304458-28314457 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366809 5261 Brassicaceae View MSA
123834192 5264 Brassicales-Malvales View MSA
124343232 5266 SBM View MSA
124253312 5268 Malvidae View MSA
124065162 5270 Rosid View MSA
123739641 5271 Pentapetalae View MSA
122791542 5272 Eudicot View MSA
122043536 5273 Angiosperm View MSA
121348628 5274 Embryophyte View MSA
123380946 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.287       Low
cufflinks 1.154        
cufflinks 0.503        
cufflinks 3.055       High
cufflinks 0.401        
cufflinks 1.104        

0 Strain