Gene : AT1G75200 A. thaliana TAIR10
Defline:  (1 of 1) 4.1.3.44 - tRNA 4-demethylwyosine synthase (AdoMet-dependent) Genomic Order:  6487
Name:  ? AT1G75200 Secondary Identifier:  ? PAC:19652760
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7286 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G75200 0.5kb upstream 0.5kb upstream 3584 true Chr1: 28220626-28224209 Arabidopsis thaliana
AT1G75200 0.5kb upstream 0.5kb upstream 500 false Chr1: 28223710-28224209 Arabidopsis thaliana
AT1G75200 0.5kb downstream 0.5kb downstream 3584 true Chr1: 28220126-28223709 Arabidopsis thaliana
AT1G75200 0.5kb downstream 0.5kb downstream 500 false Chr1: 28220126-28220625 Arabidopsis thaliana
AT1G75200 1.0kb upstream 1.0kb upstream 4084 true Chr1: 28220626-28224709 Arabidopsis thaliana
AT1G75200 1.0kb upstream 1.0kb upstream 1000 false Chr1: 28223710-28224709 Arabidopsis thaliana
AT1G75200 1.0kb downstream 1.0kb downstream 4084 true Chr1: 28219626-28223709 Arabidopsis thaliana
AT1G75200 1.0kb downstream 1.0kb downstream 1000 false Chr1: 28219626-28220625 Arabidopsis thaliana
AT1G75200 2.0kb upstream 2.0kb upstream 5084 true Chr1: 28220626-28225709 Arabidopsis thaliana
AT1G75200 2.0kb upstream 2.0kb upstream 2000 false Chr1: 28223710-28225709 Arabidopsis thaliana
AT1G75200 2.0kb downstream 2.0kb downstream 5084 true Chr1: 28218626-28223709 Arabidopsis thaliana
AT1G75200 2.0kb downstream 2.0kb downstream 2000 false Chr1: 28218626-28220625 Arabidopsis thaliana
AT1G75200 5.0kb upstream 5.0kb upstream 8084 true Chr1: 28220626-28228709 Arabidopsis thaliana
AT1G75200 5.0kb upstream 5.0kb upstream 5000 false Chr1: 28223710-28228709 Arabidopsis thaliana
AT1G75200 5.0kb downstream 5.0kb downstream 8084 true Chr1: 28215626-28223709 Arabidopsis thaliana
AT1G75200 5.0kb downstream 5.0kb downstream 5000 false Chr1: 28215626-28220625 Arabidopsis thaliana
AT1G75200 10.0kb upstream 10.0kb upstream 13084 true Chr1: 28220626-28233709 Arabidopsis thaliana
AT1G75200 10.0kb upstream 10.0kb upstream 10000 false Chr1: 28223710-28233709 Arabidopsis thaliana
AT1G75200 10.0kb downstream 10.0kb downstream 13084 true Chr1: 28210626-28223709 Arabidopsis thaliana
AT1G75200 10.0kb downstream 10.0kb downstream 10000 false Chr1: 28210626-28220625 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370981 5261 Brassicaceae View MSA
123833154 5264 Brassicales-Malvales View MSA
124321850 5266 SBM View MSA
124238866 5268 Malvidae View MSA
124066896 5270 Rosid View MSA
123737792 5271 Pentapetalae View MSA
122788596 5272 Eudicot View MSA
122045303 5273 Angiosperm View MSA
121343824 5274 Embryophyte View MSA
123426537 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.725        
cufflinks 11.59        
cufflinks 9.258       Low
cufflinks 13.302        
cufflinks 8.933       Low
cufflinks 13.31        

0 Strain