Gene : OTC A. thaliana TAIR10
Primary Identifier:  ? AT1G75330 Defline:  (1 of 1) 2.1.3.3 - Ornithine carbamoyltransferase / OTCase
Genomic Order:  6499 Name:  ? AT1G75330
Secondary Identifier:  ? PAC:19657787
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ARGSYNBSUB-PWY Arabidopsis thaliana pathologic  
Athaliana ARGSYN-PWY Arabidopsis thaliana pathologic  
Athaliana CITRULBIO-PWY Arabidopsis thaliana pathologic  
Athaliana CITRULLINE-DEG-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-4984 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G75330 0.5kb upstream 0.5kb upstream 2654 true Chr1: 28266259-28268912 Arabidopsis thaliana
AT1G75330 0.5kb upstream 0.5kb upstream 500 false Chr1: 28268413-28268912 Arabidopsis thaliana
AT1G75330 0.5kb downstream 0.5kb downstream 2654 true Chr1: 28265759-28268412 Arabidopsis thaliana
AT1G75330 0.5kb downstream 0.5kb downstream 500 false Chr1: 28265759-28266258 Arabidopsis thaliana
AT1G75330 1.0kb upstream 1.0kb upstream 3154 true Chr1: 28266259-28269412 Arabidopsis thaliana
AT1G75330 1.0kb upstream 1.0kb upstream 1000 false Chr1: 28268413-28269412 Arabidopsis thaliana
AT1G75330 1.0kb downstream 1.0kb downstream 3154 true Chr1: 28265259-28268412 Arabidopsis thaliana
AT1G75330 1.0kb downstream 1.0kb downstream 1000 false Chr1: 28265259-28266258 Arabidopsis thaliana
AT1G75330 2.0kb upstream 2.0kb upstream 4154 true Chr1: 28266259-28270412 Arabidopsis thaliana
AT1G75330 2.0kb upstream 2.0kb upstream 2000 false Chr1: 28268413-28270412 Arabidopsis thaliana
AT1G75330 2.0kb downstream 2.0kb downstream 4154 true Chr1: 28264259-28268412 Arabidopsis thaliana
AT1G75330 2.0kb downstream 2.0kb downstream 2000 false Chr1: 28264259-28266258 Arabidopsis thaliana
AT1G75330 5.0kb upstream 5.0kb upstream 7154 true Chr1: 28266259-28273412 Arabidopsis thaliana
AT1G75330 5.0kb upstream 5.0kb upstream 5000 false Chr1: 28268413-28273412 Arabidopsis thaliana
AT1G75330 5.0kb downstream 5.0kb downstream 7154 true Chr1: 28261259-28268412 Arabidopsis thaliana
AT1G75330 5.0kb downstream 5.0kb downstream 5000 false Chr1: 28261259-28266258 Arabidopsis thaliana
AT1G75330 10.0kb upstream 10.0kb upstream 12154 true Chr1: 28266259-28278412 Arabidopsis thaliana
AT1G75330 10.0kb upstream 10.0kb upstream 10000 false Chr1: 28268413-28278412 Arabidopsis thaliana
AT1G75330 10.0kb downstream 10.0kb downstream 12154 true Chr1: 28256259-28268412 Arabidopsis thaliana
AT1G75330 10.0kb downstream 10.0kb downstream 10000 false Chr1: 28256259-28266258 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365362 5261 Brassicaceae View MSA
123830074 5264 Brassicales-Malvales View MSA
124343183 5266 SBM View MSA
124239745 5268 Malvidae View MSA
124068629 5270 Rosid View MSA
123736976 5271 Pentapetalae View MSA
122787582 5272 Eudicot View MSA
122042632 5273 Angiosperm View MSA
121351468 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.077     High  
cufflinks 32.053     High Low
cufflinks 43.563     High  
cufflinks 35.33     High  
cufflinks 43.491     High  
cufflinks 35.951     High  

0 Strain