Gene : AT1G34630 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12459:SF6 - TRANSMEMBRANE PROTEIN Genomic Order:  3414
Name:  ? AT1G34630 Secondary Identifier:  ? PAC:19650623
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G34630 0.5kb upstream 0.5kb upstream 2942 true Chr1: 12684700-12687641 Arabidopsis thaliana
AT1G34630 0.5kb upstream 0.5kb upstream 500 false Chr1: 12684700-12685199 Arabidopsis thaliana
AT1G34630 0.5kb downstream 0.5kb downstream 2942 true Chr1: 12685200-12688141 Arabidopsis thaliana
AT1G34630 0.5kb downstream 0.5kb downstream 500 false Chr1: 12687642-12688141 Arabidopsis thaliana
AT1G34630 1.0kb upstream 1.0kb upstream 3442 true Chr1: 12684200-12687641 Arabidopsis thaliana
AT1G34630 1.0kb upstream 1.0kb upstream 1000 false Chr1: 12684200-12685199 Arabidopsis thaliana
AT1G34630 1.0kb downstream 1.0kb downstream 3442 true Chr1: 12685200-12688641 Arabidopsis thaliana
AT1G34630 1.0kb downstream 1.0kb downstream 1000 false Chr1: 12687642-12688641 Arabidopsis thaliana
AT1G34630 2.0kb upstream 2.0kb upstream 4442 true Chr1: 12683200-12687641 Arabidopsis thaliana
AT1G34630 2.0kb upstream 2.0kb upstream 2000 false Chr1: 12683200-12685199 Arabidopsis thaliana
AT1G34630 2.0kb downstream 2.0kb downstream 4442 true Chr1: 12685200-12689641 Arabidopsis thaliana
AT1G34630 2.0kb downstream 2.0kb downstream 2000 false Chr1: 12687642-12689641 Arabidopsis thaliana
AT1G34630 5.0kb upstream 5.0kb upstream 7442 true Chr1: 12680200-12687641 Arabidopsis thaliana
AT1G34630 5.0kb upstream 5.0kb upstream 5000 false Chr1: 12680200-12685199 Arabidopsis thaliana
AT1G34630 5.0kb downstream 5.0kb downstream 7442 true Chr1: 12685200-12692641 Arabidopsis thaliana
AT1G34630 5.0kb downstream 5.0kb downstream 5000 false Chr1: 12687642-12692641 Arabidopsis thaliana
AT1G34630 10.0kb upstream 10.0kb upstream 12442 true Chr1: 12675200-12687641 Arabidopsis thaliana
AT1G34630 10.0kb upstream 10.0kb upstream 10000 false Chr1: 12675200-12685199 Arabidopsis thaliana
AT1G34630 10.0kb downstream 10.0kb downstream 12442 true Chr1: 12685200-12697641 Arabidopsis thaliana
AT1G34630 10.0kb downstream 10.0kb downstream 10000 false Chr1: 12687642-12697641 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375848 5261 Brassicaceae View MSA
123833319 5264 Brassicales-Malvales View MSA
124341910 5266 SBM View MSA
124237797 5268 Malvidae View MSA
124065046 5270 Rosid View MSA
123736440 5271 Pentapetalae View MSA
122793822 5272 Eudicot View MSA
122042265 5273 Angiosperm View MSA
121346906 5274 Embryophyte View MSA
123424651 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.21        
cufflinks 6.008        
cufflinks 2.125       Low
cufflinks 8.011       High
cufflinks 2.404        
cufflinks 5.205        

0 Strain