Gene : EMB3003 A. thaliana TAIR10
Primary Identifier:  ? AT1G34430 Defline:  (1 of 2) PTHR23151//PTHR23151:SF61 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED // SUBFAMILY NOT NAMED
Genomic Order:  3399 Name:  ? AT1G34430
Secondary Identifier:  ? PAC:19652330
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5173 Arabidopsis thaliana pathologic  
Athaliana PWY-5464 Arabidopsis thaliana pathologic  
Athaliana PYRUVDEHYD-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G34430 0.5kb upstream 0.5kb upstream 2941 true Chr1: 12587752-12590692 Arabidopsis thaliana
AT1G34430 0.5kb upstream 0.5kb upstream 500 false Chr1: 12590193-12590692 Arabidopsis thaliana
AT1G34430 0.5kb downstream 0.5kb downstream 2941 true Chr1: 12587252-12590192 Arabidopsis thaliana
AT1G34430 0.5kb downstream 0.5kb downstream 500 false Chr1: 12587252-12587751 Arabidopsis thaliana
AT1G34430 1.0kb upstream 1.0kb upstream 3441 true Chr1: 12587752-12591192 Arabidopsis thaliana
AT1G34430 1.0kb upstream 1.0kb upstream 1000 false Chr1: 12590193-12591192 Arabidopsis thaliana
AT1G34430 1.0kb downstream 1.0kb downstream 3441 true Chr1: 12586752-12590192 Arabidopsis thaliana
AT1G34430 1.0kb downstream 1.0kb downstream 1000 false Chr1: 12586752-12587751 Arabidopsis thaliana
AT1G34430 2.0kb upstream 2.0kb upstream 4441 true Chr1: 12587752-12592192 Arabidopsis thaliana
AT1G34430 2.0kb upstream 2.0kb upstream 2000 false Chr1: 12590193-12592192 Arabidopsis thaliana
AT1G34430 2.0kb downstream 2.0kb downstream 4441 true Chr1: 12585752-12590192 Arabidopsis thaliana
AT1G34430 2.0kb downstream 2.0kb downstream 2000 false Chr1: 12585752-12587751 Arabidopsis thaliana
AT1G34430 5.0kb upstream 5.0kb upstream 7441 true Chr1: 12587752-12595192 Arabidopsis thaliana
AT1G34430 5.0kb upstream 5.0kb upstream 5000 false Chr1: 12590193-12595192 Arabidopsis thaliana
AT1G34430 5.0kb downstream 5.0kb downstream 7441 true Chr1: 12582752-12590192 Arabidopsis thaliana
AT1G34430 5.0kb downstream 5.0kb downstream 5000 false Chr1: 12582752-12587751 Arabidopsis thaliana
AT1G34430 10.0kb upstream 10.0kb upstream 12441 true Chr1: 12587752-12600192 Arabidopsis thaliana
AT1G34430 10.0kb upstream 10.0kb upstream 10000 false Chr1: 12590193-12600192 Arabidopsis thaliana
AT1G34430 10.0kb downstream 10.0kb downstream 12441 true Chr1: 12577752-12590192 Arabidopsis thaliana
AT1G34430 10.0kb downstream 10.0kb downstream 10000 false Chr1: 12577752-12587751 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371991 5261 Brassicaceae View MSA
123833384 5264 Brassicales-Malvales View MSA
124343361 5266 SBM View MSA
124252180 5268 Malvidae View MSA
124064326 5270 Rosid View MSA
123740980 5271 Pentapetalae View MSA
122792137 5272 Eudicot View MSA
122047464 5273 Angiosperm View MSA
121347035 5274 Embryophyte View MSA
123424416 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.786     High  
cufflinks 20.323       Low
cufflinks 36.508     High High
cufflinks 24.581        
cufflinks 29.159     High  
cufflinks 32.011     High  

0 Strain