Gene : OHP2 A. thaliana TAIR10
Primary Identifier:  ? AT1G34000 Defline:  one-helix protein 2
Genomic Order:  3353 Name:  ? AT1G34000
Secondary Identifier:  ? PAC:19650854
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G34000 0.5kb upstream 0.5kb upstream 1557 true Chr1: 12357910-12359466 Arabidopsis thaliana
AT1G34000 0.5kb upstream 0.5kb upstream 500 false Chr1: 12358967-12359466 Arabidopsis thaliana
AT1G34000 0.5kb downstream 0.5kb downstream 1557 true Chr1: 12357410-12358966 Arabidopsis thaliana
AT1G34000 0.5kb downstream 0.5kb downstream 500 false Chr1: 12357410-12357909 Arabidopsis thaliana
AT1G34000 1.0kb upstream 1.0kb upstream 2057 true Chr1: 12357910-12359966 Arabidopsis thaliana
AT1G34000 1.0kb upstream 1.0kb upstream 1000 false Chr1: 12358967-12359966 Arabidopsis thaliana
AT1G34000 1.0kb downstream 1.0kb downstream 2057 true Chr1: 12356910-12358966 Arabidopsis thaliana
AT1G34000 1.0kb downstream 1.0kb downstream 1000 false Chr1: 12356910-12357909 Arabidopsis thaliana
AT1G34000 2.0kb upstream 2.0kb upstream 3057 true Chr1: 12357910-12360966 Arabidopsis thaliana
AT1G34000 2.0kb upstream 2.0kb upstream 2000 false Chr1: 12358967-12360966 Arabidopsis thaliana
AT1G34000 2.0kb downstream 2.0kb downstream 3057 true Chr1: 12355910-12358966 Arabidopsis thaliana
AT1G34000 2.0kb downstream 2.0kb downstream 2000 false Chr1: 12355910-12357909 Arabidopsis thaliana
AT1G34000 5.0kb upstream 5.0kb upstream 6057 true Chr1: 12357910-12363966 Arabidopsis thaliana
AT1G34000 5.0kb upstream 5.0kb upstream 5000 false Chr1: 12358967-12363966 Arabidopsis thaliana
AT1G34000 5.0kb downstream 5.0kb downstream 6057 true Chr1: 12352910-12358966 Arabidopsis thaliana
AT1G34000 5.0kb downstream 5.0kb downstream 5000 false Chr1: 12352910-12357909 Arabidopsis thaliana
AT1G34000 10.0kb upstream 10.0kb upstream 11057 true Chr1: 12357910-12368966 Arabidopsis thaliana
AT1G34000 10.0kb upstream 10.0kb upstream 10000 false Chr1: 12358967-12368966 Arabidopsis thaliana
AT1G34000 10.0kb downstream 10.0kb downstream 11057 true Chr1: 12347910-12358966 Arabidopsis thaliana
AT1G34000 10.0kb downstream 10.0kb downstream 10000 false Chr1: 12347910-12357909 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366030 5261 Brassicaceae View MSA
123838735 5264 Brassicales-Malvales View MSA
124338871 5266 SBM View MSA
124251020 5268 Malvidae View MSA
124063800 5270 Rosid View MSA
123736472 5271 Pentapetalae View MSA
122789298 5272 Eudicot View MSA
122046872 5273 Angiosperm View MSA
121349731 5274 Embryophyte View MSA
123425778 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 89.426     High  
cufflinks 6.425        
cufflinks 122.846     High  
cufflinks 4.416        
cufflinks 115.15     High  
cufflinks 4.334        

0 Strain