Sequence Feature Displayer
Ontology Annotation Displayer
1 Pathways
Pathway Identifier | Organism Name | Analysis Method | Analysis Status |
---|---|---|---|
Athaliana LIPAS-PWY | Arabidopsis thaliana | pathologic |
Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT1G33811 0.5kb upstream | 0.5kb | upstream | 2548 | true | Chr1: 12267366-12269913 | Arabidopsis thaliana |
AT1G33811 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr1: 12267366-12267865 | Arabidopsis thaliana |
AT1G33811 0.5kb downstream | 0.5kb | downstream | 2548 | true | Chr1: 12267866-12270413 | Arabidopsis thaliana |
AT1G33811 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr1: 12269914-12270413 | Arabidopsis thaliana |
AT1G33811 1.0kb upstream | 1.0kb | upstream | 3048 | true | Chr1: 12266866-12269913 | Arabidopsis thaliana |
AT1G33811 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr1: 12266866-12267865 | Arabidopsis thaliana |
AT1G33811 1.0kb downstream | 1.0kb | downstream | 3048 | true | Chr1: 12267866-12270913 | Arabidopsis thaliana |
AT1G33811 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr1: 12269914-12270913 | Arabidopsis thaliana |
AT1G33811 2.0kb upstream | 2.0kb | upstream | 4048 | true | Chr1: 12265866-12269913 | Arabidopsis thaliana |
AT1G33811 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr1: 12265866-12267865 | Arabidopsis thaliana |
AT1G33811 2.0kb downstream | 2.0kb | downstream | 4048 | true | Chr1: 12267866-12271913 | Arabidopsis thaliana |
AT1G33811 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr1: 12269914-12271913 | Arabidopsis thaliana |
AT1G33811 5.0kb upstream | 5.0kb | upstream | 7048 | true | Chr1: 12262866-12269913 | Arabidopsis thaliana |
AT1G33811 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr1: 12262866-12267865 | Arabidopsis thaliana |
AT1G33811 5.0kb downstream | 5.0kb | downstream | 7048 | true | Chr1: 12267866-12274913 | Arabidopsis thaliana |
AT1G33811 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr1: 12269914-12274913 | Arabidopsis thaliana |
AT1G33811 10.0kb upstream | 10.0kb | upstream | 12048 | true | Chr1: 12257866-12269913 | Arabidopsis thaliana |
AT1G33811 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr1: 12257866-12267865 | Arabidopsis thaliana |
AT1G33811 10.0kb downstream | 10.0kb | downstream | 12048 | true | Chr1: 12267866-12279913 | Arabidopsis thaliana |
AT1G33811 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr1: 12269914-12279913 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122374702 | 5261 | Brassicaceae | View MSA |
123830494 | 5264 | Brassicales-Malvales | View MSA |
124342316 | 5266 | SBM | View MSA |
124238632 | 5268 | Malvidae | View MSA |
124067838 | 5270 | Rosid | View MSA |
123737678 | 5271 | Pentapetalae | View MSA |
122786109 | 5272 | Eudicot | View MSA |
122042489 | 5273 | Angiosperm | View MSA |
121351762 | 5274 | Embryophyte | View MSA |
123428079 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 12.973 | ||||
cufflinks | 0.044 | Low | Low | ||
cufflinks | 7.199 | ||||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 4.908 | ||||
cufflinks | 0.0 | Not Expressed | Not Expressed |