Gene : AT1G33100 A. thaliana TAIR10
Defline:  (1 of 4) PTHR11206//PTHR11206:SF102 - MULTIDRUG RESISTANCE PROTEIN // MATE EFFLUX FAMILY PROTEIN Genomic Order:  3278
Name:  ? AT1G33100 Secondary Identifier:  ? PAC:19656823
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G33100 0.5kb upstream 0.5kb upstream 4126 true Chr1: 11997183-12001308 Arabidopsis thaliana
AT1G33100 0.5kb upstream 0.5kb upstream 500 false Chr1: 11997183-11997682 Arabidopsis thaliana
AT1G33100 0.5kb downstream 0.5kb downstream 4126 true Chr1: 11997683-12001808 Arabidopsis thaliana
AT1G33100 0.5kb downstream 0.5kb downstream 500 false Chr1: 12001309-12001808 Arabidopsis thaliana
AT1G33100 1.0kb upstream 1.0kb upstream 4626 true Chr1: 11996683-12001308 Arabidopsis thaliana
AT1G33100 1.0kb upstream 1.0kb upstream 1000 false Chr1: 11996683-11997682 Arabidopsis thaliana
AT1G33100 1.0kb downstream 1.0kb downstream 4626 true Chr1: 11997683-12002308 Arabidopsis thaliana
AT1G33100 1.0kb downstream 1.0kb downstream 1000 false Chr1: 12001309-12002308 Arabidopsis thaliana
AT1G33100 2.0kb upstream 2.0kb upstream 5626 true Chr1: 11995683-12001308 Arabidopsis thaliana
AT1G33100 2.0kb upstream 2.0kb upstream 2000 false Chr1: 11995683-11997682 Arabidopsis thaliana
AT1G33100 2.0kb downstream 2.0kb downstream 5626 true Chr1: 11997683-12003308 Arabidopsis thaliana
AT1G33100 2.0kb downstream 2.0kb downstream 2000 false Chr1: 12001309-12003308 Arabidopsis thaliana
AT1G33100 5.0kb upstream 5.0kb upstream 8626 true Chr1: 11992683-12001308 Arabidopsis thaliana
AT1G33100 5.0kb upstream 5.0kb upstream 5000 false Chr1: 11992683-11997682 Arabidopsis thaliana
AT1G33100 5.0kb downstream 5.0kb downstream 8626 true Chr1: 11997683-12006308 Arabidopsis thaliana
AT1G33100 5.0kb downstream 5.0kb downstream 5000 false Chr1: 12001309-12006308 Arabidopsis thaliana
AT1G33100 10.0kb upstream 10.0kb upstream 13626 true Chr1: 11987683-12001308 Arabidopsis thaliana
AT1G33100 10.0kb upstream 10.0kb upstream 10000 false Chr1: 11987683-11997682 Arabidopsis thaliana
AT1G33100 10.0kb downstream 10.0kb downstream 13626 true Chr1: 11997683-12011308 Arabidopsis thaliana
AT1G33100 10.0kb downstream 10.0kb downstream 10000 false Chr1: 12001309-12011308 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031058 5273 Angiosperm View MSA
122328969 5261 Brassicaceae Singleton cluster - no MSA
123770293 5264 Brassicales-Malvales Singleton cluster - no MSA
124268835 5266 SBM Singleton cluster - no MSA
124125009 5268 Malvidae Singleton cluster - no MSA
123854005 5270 Rosid Singleton cluster - no MSA
123440038 5271 Pentapetalae Singleton cluster - no MSA
122475628 5272 Eudicot Singleton cluster - no MSA
121300157 5274 Embryophyte View MSA
123337956 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.087     Low Low
cufflinks 0.154     Low  
cufflinks 0.119     Low  
cufflinks 0.481       High
cufflinks 0.165     Low  
cufflinks 0.266     Low  

0 Strain