Gene : KAN2 A. thaliana TAIR10
Primary Identifier:  ? AT1G32240 Defline:  (1 of 2) PTHR31496//PTHR31496:SF10 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR KAN2-RELATED
Genomic Order:  3192 Name:  ? AT1G32240
Secondary Identifier:  ? PAC:19654016
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G32240 0.5kb upstream 0.5kb upstream 5427 true Chr1: 11625700-11631126 Arabidopsis thaliana
AT1G32240 0.5kb upstream 0.5kb upstream 500 false Chr1: 11630627-11631126 Arabidopsis thaliana
AT1G32240 0.5kb downstream 0.5kb downstream 5427 true Chr1: 11625200-11630626 Arabidopsis thaliana
AT1G32240 0.5kb downstream 0.5kb downstream 500 false Chr1: 11625200-11625699 Arabidopsis thaliana
AT1G32240 1.0kb upstream 1.0kb upstream 5927 true Chr1: 11625700-11631626 Arabidopsis thaliana
AT1G32240 1.0kb upstream 1.0kb upstream 1000 false Chr1: 11630627-11631626 Arabidopsis thaliana
AT1G32240 1.0kb downstream 1.0kb downstream 5927 true Chr1: 11624700-11630626 Arabidopsis thaliana
AT1G32240 1.0kb downstream 1.0kb downstream 1000 false Chr1: 11624700-11625699 Arabidopsis thaliana
AT1G32240 2.0kb upstream 2.0kb upstream 6927 true Chr1: 11625700-11632626 Arabidopsis thaliana
AT1G32240 2.0kb upstream 2.0kb upstream 2000 false Chr1: 11630627-11632626 Arabidopsis thaliana
AT1G32240 2.0kb downstream 2.0kb downstream 6927 true Chr1: 11623700-11630626 Arabidopsis thaliana
AT1G32240 2.0kb downstream 2.0kb downstream 2000 false Chr1: 11623700-11625699 Arabidopsis thaliana
AT1G32240 5.0kb upstream 5.0kb upstream 9927 true Chr1: 11625700-11635626 Arabidopsis thaliana
AT1G32240 5.0kb upstream 5.0kb upstream 5000 false Chr1: 11630627-11635626 Arabidopsis thaliana
AT1G32240 5.0kb downstream 5.0kb downstream 9927 true Chr1: 11620700-11630626 Arabidopsis thaliana
AT1G32240 5.0kb downstream 5.0kb downstream 5000 false Chr1: 11620700-11625699 Arabidopsis thaliana
AT1G32240 10.0kb upstream 10.0kb upstream 14927 true Chr1: 11625700-11640626 Arabidopsis thaliana
AT1G32240 10.0kb upstream 10.0kb upstream 10000 false Chr1: 11630627-11640626 Arabidopsis thaliana
AT1G32240 10.0kb downstream 10.0kb downstream 14927 true Chr1: 11615700-11630626 Arabidopsis thaliana
AT1G32240 10.0kb downstream 10.0kb downstream 10000 false Chr1: 11615700-11625699 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362443 5261 Brassicaceae View MSA
123832390 5264 Brassicales-Malvales View MSA
124351224 5266 SBM View MSA
124247804 5268 Malvidae View MSA
124060556 5270 Rosid View MSA
123746843 5271 Pentapetalae View MSA
122791651 5272 Eudicot View MSA
122051060 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349698 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.881        
cufflinks 4.494        
cufflinks 0.759        
cufflinks 3.621        
cufflinks 0.465       Low
cufflinks 4.645        

0 Strain