Gene : XTH30 A. thaliana TAIR10
Primary Identifier:  ? AT1G32170 Defline:  (1 of 2) PTHR31062//PTHR31062:SF16 - FAMILY NOT NAMED // XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 29-RELATED
Genomic Order:  3184 Name:  ? AT1G32170
Secondary Identifier:  ? PAC:19652181
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G32170 0.5kb upstream 0.5kb upstream 3108 true Chr1: 11574820-11577927 Arabidopsis thaliana
AT1G32170 0.5kb upstream 0.5kb upstream 500 false Chr1: 11574820-11575319 Arabidopsis thaliana
AT1G32170 0.5kb downstream 0.5kb downstream 3108 true Chr1: 11575320-11578427 Arabidopsis thaliana
AT1G32170 0.5kb downstream 0.5kb downstream 500 false Chr1: 11577928-11578427 Arabidopsis thaliana
AT1G32170 1.0kb upstream 1.0kb upstream 3608 true Chr1: 11574320-11577927 Arabidopsis thaliana
AT1G32170 1.0kb upstream 1.0kb upstream 1000 false Chr1: 11574320-11575319 Arabidopsis thaliana
AT1G32170 1.0kb downstream 1.0kb downstream 3608 true Chr1: 11575320-11578927 Arabidopsis thaliana
AT1G32170 1.0kb downstream 1.0kb downstream 1000 false Chr1: 11577928-11578927 Arabidopsis thaliana
AT1G32170 2.0kb upstream 2.0kb upstream 4608 true Chr1: 11573320-11577927 Arabidopsis thaliana
AT1G32170 2.0kb upstream 2.0kb upstream 2000 false Chr1: 11573320-11575319 Arabidopsis thaliana
AT1G32170 2.0kb downstream 2.0kb downstream 4608 true Chr1: 11575320-11579927 Arabidopsis thaliana
AT1G32170 2.0kb downstream 2.0kb downstream 2000 false Chr1: 11577928-11579927 Arabidopsis thaliana
AT1G32170 5.0kb upstream 5.0kb upstream 7608 true Chr1: 11570320-11577927 Arabidopsis thaliana
AT1G32170 5.0kb upstream 5.0kb upstream 5000 false Chr1: 11570320-11575319 Arabidopsis thaliana
AT1G32170 5.0kb downstream 5.0kb downstream 7608 true Chr1: 11575320-11582927 Arabidopsis thaliana
AT1G32170 5.0kb downstream 5.0kb downstream 5000 false Chr1: 11577928-11582927 Arabidopsis thaliana
AT1G32170 10.0kb upstream 10.0kb upstream 12608 true Chr1: 11565320-11577927 Arabidopsis thaliana
AT1G32170 10.0kb upstream 10.0kb upstream 10000 false Chr1: 11565320-11575319 Arabidopsis thaliana
AT1G32170 10.0kb downstream 10.0kb downstream 12608 true Chr1: 11575320-11587927 Arabidopsis thaliana
AT1G32170 10.0kb downstream 10.0kb downstream 10000 false Chr1: 11577928-11587927 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380766 5261 Brassicaceae View MSA
123834077 5264 Brassicales-Malvales View MSA
124346301 5266 SBM View MSA
124244671 5268 Malvidae View MSA
124067277 5270 Rosid View MSA
123745319 5271 Pentapetalae View MSA
122794660 5272 Eudicot View MSA
122049542 5273 Angiosperm View MSA
121347970 5274 Embryophyte View MSA
123380694 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.35        
cufflinks 17.526       High
cufflinks 4.009       Low
cufflinks 14.723        
cufflinks 4.076       Low
cufflinks 16.762        

0 Strain