Gene : NFD3 A. thaliana TAIR10
Primary Identifier:  ? AT1G31817 Defline:  (1 of 1) PTHR11759:SF8 - 30S RIBOSOMAL PROTEIN S11-RELATED
Genomic Order:  3150 Name:  ? AT1G31817
Secondary Identifier:  ? PAC:19652430
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G31817 0.5kb upstream 0.5kb upstream 2196 true Chr1: 11414749-11416944 Arabidopsis thaliana
AT1G31817 0.5kb upstream 0.5kb upstream 500 false Chr1: 11416445-11416944 Arabidopsis thaliana
AT1G31817 0.5kb downstream 0.5kb downstream 2196 true Chr1: 11414249-11416444 Arabidopsis thaliana
AT1G31817 0.5kb downstream 0.5kb downstream 500 false Chr1: 11414249-11414748 Arabidopsis thaliana
AT1G31817 1.0kb upstream 1.0kb upstream 2696 true Chr1: 11414749-11417444 Arabidopsis thaliana
AT1G31817 1.0kb upstream 1.0kb upstream 1000 false Chr1: 11416445-11417444 Arabidopsis thaliana
AT1G31817 1.0kb downstream 1.0kb downstream 2696 true Chr1: 11413749-11416444 Arabidopsis thaliana
AT1G31817 1.0kb downstream 1.0kb downstream 1000 false Chr1: 11413749-11414748 Arabidopsis thaliana
AT1G31817 2.0kb upstream 2.0kb upstream 3696 true Chr1: 11414749-11418444 Arabidopsis thaliana
AT1G31817 2.0kb upstream 2.0kb upstream 2000 false Chr1: 11416445-11418444 Arabidopsis thaliana
AT1G31817 2.0kb downstream 2.0kb downstream 3696 true Chr1: 11412749-11416444 Arabidopsis thaliana
AT1G31817 2.0kb downstream 2.0kb downstream 2000 false Chr1: 11412749-11414748 Arabidopsis thaliana
AT1G31817 5.0kb upstream 5.0kb upstream 6696 true Chr1: 11414749-11421444 Arabidopsis thaliana
AT1G31817 5.0kb upstream 5.0kb upstream 5000 false Chr1: 11416445-11421444 Arabidopsis thaliana
AT1G31817 5.0kb downstream 5.0kb downstream 6696 true Chr1: 11409749-11416444 Arabidopsis thaliana
AT1G31817 5.0kb downstream 5.0kb downstream 5000 false Chr1: 11409749-11414748 Arabidopsis thaliana
AT1G31817 10.0kb upstream 10.0kb upstream 11696 true Chr1: 11414749-11426444 Arabidopsis thaliana
AT1G31817 10.0kb upstream 10.0kb upstream 10000 false Chr1: 11416445-11426444 Arabidopsis thaliana
AT1G31817 10.0kb downstream 10.0kb downstream 11696 true Chr1: 11404749-11416444 Arabidopsis thaliana
AT1G31817 10.0kb downstream 10.0kb downstream 10000 false Chr1: 11404749-11414748 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373958 5261 Brassicaceae View MSA
123833324 5264 Brassicales-Malvales View MSA
124348983 5266 SBM View MSA
124249427 5268 Malvidae View MSA
124071530 5270 Rosid View MSA
123751156 5271 Pentapetalae View MSA
122793979 5272 Eudicot View MSA
122049746 5273 Angiosperm View MSA
121350914 5274 Embryophyte View MSA
123426853 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.258        
cufflinks 14.263        
cufflinks 9.819        
cufflinks 15.322        
cufflinks 8.694       Low
cufflinks 17.671       High

0 Strain