Gene : AT1G31220 A. thaliana TAIR10
Defline:  (1 of 1) 2.1.2.2 - Phosphoribosylglycinamide formyltransferase / Glycinamide ribonucleotide transformylase Genomic Order:  3091
Name:  ? AT1G31220 Secondary Identifier:  ? PAC:19655457
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6121 Arabidopsis thaliana pathologic  
Athaliana PWY-6613 Arabidopsis thaliana pathologic  
Athaliana PWY-841 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G31220 0.5kb upstream 0.5kb upstream 2382 true Chr1: 11156302-11158683 Arabidopsis thaliana
AT1G31220 0.5kb upstream 0.5kb upstream 500 false Chr1: 11156302-11156801 Arabidopsis thaliana
AT1G31220 0.5kb downstream 0.5kb downstream 2382 true Chr1: 11156802-11159183 Arabidopsis thaliana
AT1G31220 0.5kb downstream 0.5kb downstream 500 false Chr1: 11158684-11159183 Arabidopsis thaliana
AT1G31220 1.0kb upstream 1.0kb upstream 2882 true Chr1: 11155802-11158683 Arabidopsis thaliana
AT1G31220 1.0kb upstream 1.0kb upstream 1000 false Chr1: 11155802-11156801 Arabidopsis thaliana
AT1G31220 1.0kb downstream 1.0kb downstream 2882 true Chr1: 11156802-11159683 Arabidopsis thaliana
AT1G31220 1.0kb downstream 1.0kb downstream 1000 false Chr1: 11158684-11159683 Arabidopsis thaliana
AT1G31220 2.0kb upstream 2.0kb upstream 3882 true Chr1: 11154802-11158683 Arabidopsis thaliana
AT1G31220 2.0kb upstream 2.0kb upstream 2000 false Chr1: 11154802-11156801 Arabidopsis thaliana
AT1G31220 2.0kb downstream 2.0kb downstream 3882 true Chr1: 11156802-11160683 Arabidopsis thaliana
AT1G31220 2.0kb downstream 2.0kb downstream 2000 false Chr1: 11158684-11160683 Arabidopsis thaliana
AT1G31220 5.0kb upstream 5.0kb upstream 6882 true Chr1: 11151802-11158683 Arabidopsis thaliana
AT1G31220 5.0kb upstream 5.0kb upstream 5000 false Chr1: 11151802-11156801 Arabidopsis thaliana
AT1G31220 5.0kb downstream 5.0kb downstream 6882 true Chr1: 11156802-11163683 Arabidopsis thaliana
AT1G31220 5.0kb downstream 5.0kb downstream 5000 false Chr1: 11158684-11163683 Arabidopsis thaliana
AT1G31220 10.0kb upstream 10.0kb upstream 11882 true Chr1: 11146802-11158683 Arabidopsis thaliana
AT1G31220 10.0kb upstream 10.0kb upstream 10000 false Chr1: 11146802-11156801 Arabidopsis thaliana
AT1G31220 10.0kb downstream 10.0kb downstream 11882 true Chr1: 11156802-11168683 Arabidopsis thaliana
AT1G31220 10.0kb downstream 10.0kb downstream 10000 false Chr1: 11158684-11168683 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370229 5261 Brassicaceae View MSA
123835311 5264 Brassicales-Malvales View MSA
124339680 5266 SBM View MSA
124244767 5268 Malvidae View MSA
124065104 5270 Rosid View MSA
123739815 5271 Pentapetalae View MSA
122788812 5272 Eudicot View MSA
122049914 5273 Angiosperm View MSA
121349551 5274 Embryophyte View MSA
123426469 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.33       High
cufflinks 7.208        
cufflinks 5.067       Low
cufflinks 7.257        
cufflinks 5.361       Low
cufflinks 7.071        

0 Strain