Gene : SUF4 A. thaliana TAIR10
Primary Identifier:  ? AT1G30970 Defline:  (1 of 1) PTHR23215 - ZINC FINGER PROTEIN 207
Genomic Order:  3068 Name:  ? AT1G30970
Secondary Identifier:  ? PAC:19649217
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G30970 0.5kb upstream 0.5kb upstream 3971 true Chr1: 11040281-11044251 Arabidopsis thaliana
AT1G30970 0.5kb upstream 0.5kb upstream 500 false Chr1: 11043752-11044251 Arabidopsis thaliana
AT1G30970 0.5kb downstream 0.5kb downstream 3971 true Chr1: 11039781-11043751 Arabidopsis thaliana
AT1G30970 0.5kb downstream 0.5kb downstream 500 false Chr1: 11039781-11040280 Arabidopsis thaliana
AT1G30970 1.0kb upstream 1.0kb upstream 4471 true Chr1: 11040281-11044751 Arabidopsis thaliana
AT1G30970 1.0kb upstream 1.0kb upstream 1000 false Chr1: 11043752-11044751 Arabidopsis thaliana
AT1G30970 1.0kb downstream 1.0kb downstream 4471 true Chr1: 11039281-11043751 Arabidopsis thaliana
AT1G30970 1.0kb downstream 1.0kb downstream 1000 false Chr1: 11039281-11040280 Arabidopsis thaliana
AT1G30970 2.0kb upstream 2.0kb upstream 5471 true Chr1: 11040281-11045751 Arabidopsis thaliana
AT1G30970 2.0kb upstream 2.0kb upstream 2000 false Chr1: 11043752-11045751 Arabidopsis thaliana
AT1G30970 2.0kb downstream 2.0kb downstream 5471 true Chr1: 11038281-11043751 Arabidopsis thaliana
AT1G30970 2.0kb downstream 2.0kb downstream 2000 false Chr1: 11038281-11040280 Arabidopsis thaliana
AT1G30970 5.0kb upstream 5.0kb upstream 8471 true Chr1: 11040281-11048751 Arabidopsis thaliana
AT1G30970 5.0kb upstream 5.0kb upstream 5000 false Chr1: 11043752-11048751 Arabidopsis thaliana
AT1G30970 5.0kb downstream 5.0kb downstream 8471 true Chr1: 11035281-11043751 Arabidopsis thaliana
AT1G30970 5.0kb downstream 5.0kb downstream 5000 false Chr1: 11035281-11040280 Arabidopsis thaliana
AT1G30970 10.0kb upstream 10.0kb upstream 13471 true Chr1: 11040281-11053751 Arabidopsis thaliana
AT1G30970 10.0kb upstream 10.0kb upstream 10000 false Chr1: 11043752-11053751 Arabidopsis thaliana
AT1G30970 10.0kb downstream 10.0kb downstream 13471 true Chr1: 11030281-11043751 Arabidopsis thaliana
AT1G30970 10.0kb downstream 10.0kb downstream 10000 false Chr1: 11030281-11040280 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371875 5261 Brassicaceae View MSA
123829740 5264 Brassicales-Malvales View MSA
124345726 5266 SBM View MSA
124240150 5268 Malvidae View MSA
124074836 5270 Rosid View MSA
123741214 5271 Pentapetalae View MSA
122787511 5272 Eudicot View MSA
122042618 5273 Angiosperm View MSA
121345299 5274 Embryophyte View MSA
123425061 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.128       Low
cufflinks 10.625       High
cufflinks 6.861        
cufflinks 11.52       High
cufflinks 6.504        
cufflinks 8.049        

0 Strain