Gene : AT1G30890 A. thaliana TAIR10
Defline:  (1 of 2) PTHR14083 - YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEIN Genomic Order:  3060
Name:  ? AT1G30890 Secondary Identifier:  ? PAC:19657874
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G30890 0.5kb upstream 0.5kb upstream 2314 true Chr1: 10993821-10996134 Arabidopsis thaliana
AT1G30890 0.5kb upstream 0.5kb upstream 500 false Chr1: 10993821-10994320 Arabidopsis thaliana
AT1G30890 0.5kb downstream 0.5kb downstream 2314 true Chr1: 10994321-10996634 Arabidopsis thaliana
AT1G30890 0.5kb downstream 0.5kb downstream 500 false Chr1: 10996135-10996634 Arabidopsis thaliana
AT1G30890 1.0kb upstream 1.0kb upstream 2814 true Chr1: 10993321-10996134 Arabidopsis thaliana
AT1G30890 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10993321-10994320 Arabidopsis thaliana
AT1G30890 1.0kb downstream 1.0kb downstream 2814 true Chr1: 10994321-10997134 Arabidopsis thaliana
AT1G30890 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10996135-10997134 Arabidopsis thaliana
AT1G30890 2.0kb upstream 2.0kb upstream 3814 true Chr1: 10992321-10996134 Arabidopsis thaliana
AT1G30890 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10992321-10994320 Arabidopsis thaliana
AT1G30890 2.0kb downstream 2.0kb downstream 3814 true Chr1: 10994321-10998134 Arabidopsis thaliana
AT1G30890 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10996135-10998134 Arabidopsis thaliana
AT1G30890 5.0kb upstream 5.0kb upstream 6814 true Chr1: 10989321-10996134 Arabidopsis thaliana
AT1G30890 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10989321-10994320 Arabidopsis thaliana
AT1G30890 5.0kb downstream 5.0kb downstream 6814 true Chr1: 10994321-11001134 Arabidopsis thaliana
AT1G30890 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10996135-11001134 Arabidopsis thaliana
AT1G30890 10.0kb upstream 10.0kb upstream 11814 true Chr1: 10984321-10996134 Arabidopsis thaliana
AT1G30890 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10984321-10994320 Arabidopsis thaliana
AT1G30890 10.0kb downstream 10.0kb downstream 11814 true Chr1: 10994321-11006134 Arabidopsis thaliana
AT1G30890 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10996135-11006134 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372001 5261 Brassicaceae View MSA
123836969 5264 Brassicales-Malvales View MSA
124343143 5266 SBM View MSA
124252897 5268 Malvidae View MSA
124072986 5270 Rosid View MSA
123752428 5271 Pentapetalae View MSA
122785612 5272 Eudicot View MSA
122043920 5273 Angiosperm View MSA
121346017 5274 Embryophyte View MSA
123427563 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.402        
cufflinks 4.666        
cufflinks 3.683       Low
cufflinks 5.579        
cufflinks 3.86       Low
cufflinks 6.093       High

0 Strain