Gene : AT1G30630 A. thaliana TAIR10
Defline:  (1 of 2) K17268 - coatomer protein complex, subunit epsilon (COPE) Genomic Order:  3030
Name:  ? AT1G30630 Secondary Identifier:  ? PAC:19653911
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G30630 0.5kb upstream 0.5kb upstream 2464 true Chr1: 10858298-10860761 Arabidopsis thaliana
AT1G30630 0.5kb upstream 0.5kb upstream 500 false Chr1: 10860262-10860761 Arabidopsis thaliana
AT1G30630 0.5kb downstream 0.5kb downstream 2464 true Chr1: 10857798-10860261 Arabidopsis thaliana
AT1G30630 0.5kb downstream 0.5kb downstream 500 false Chr1: 10857798-10858297 Arabidopsis thaliana
AT1G30630 1.0kb upstream 1.0kb upstream 2964 true Chr1: 10858298-10861261 Arabidopsis thaliana
AT1G30630 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10860262-10861261 Arabidopsis thaliana
AT1G30630 1.0kb downstream 1.0kb downstream 2964 true Chr1: 10857298-10860261 Arabidopsis thaliana
AT1G30630 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10857298-10858297 Arabidopsis thaliana
AT1G30630 2.0kb upstream 2.0kb upstream 3964 true Chr1: 10858298-10862261 Arabidopsis thaliana
AT1G30630 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10860262-10862261 Arabidopsis thaliana
AT1G30630 2.0kb downstream 2.0kb downstream 3964 true Chr1: 10856298-10860261 Arabidopsis thaliana
AT1G30630 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10856298-10858297 Arabidopsis thaliana
AT1G30630 5.0kb upstream 5.0kb upstream 6964 true Chr1: 10858298-10865261 Arabidopsis thaliana
AT1G30630 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10860262-10865261 Arabidopsis thaliana
AT1G30630 5.0kb downstream 5.0kb downstream 6964 true Chr1: 10853298-10860261 Arabidopsis thaliana
AT1G30630 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10853298-10858297 Arabidopsis thaliana
AT1G30630 10.0kb upstream 10.0kb upstream 11964 true Chr1: 10858298-10870261 Arabidopsis thaliana
AT1G30630 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10860262-10870261 Arabidopsis thaliana
AT1G30630 10.0kb downstream 10.0kb downstream 11964 true Chr1: 10848298-10860261 Arabidopsis thaliana
AT1G30630 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10848298-10858297 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369840 5261 Brassicaceae View MSA
123839531 5264 Brassicales-Malvales View MSA
124351412 5266 SBM View MSA
124240512 5268 Malvidae View MSA
124061720 5270 Rosid View MSA
123739353 5271 Pentapetalae View MSA
122787483 5272 Eudicot View MSA
122042986 5273 Angiosperm View MSA
121344320 5274 Embryophyte View MSA
123426837 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.679     High  
cufflinks 51.914     High  
cufflinks 33.654     High Low
cufflinks 55.605     High  
cufflinks 36.433     High  
cufflinks 69.834     High High

0 Strain