Gene : AT1G30730 A. thaliana TAIR10
Defline:  (1 of 4) PTHR32448//PTHR32448:SF25 - FAMILY NOT NAMED // FAD-BINDING BERBERINE FAMILY PROTEIN-RELATED Genomic Order:  3040
Name:  ? AT1G30730 Secondary Identifier:  ? PAC:19649953
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G30730 0.5kb upstream 0.5kb upstream 2181 true Chr1: 10900354-10902534 Arabidopsis thaliana
AT1G30730 0.5kb upstream 0.5kb upstream 500 false Chr1: 10900354-10900853 Arabidopsis thaliana
AT1G30730 0.5kb downstream 0.5kb downstream 2181 true Chr1: 10900854-10903034 Arabidopsis thaliana
AT1G30730 0.5kb downstream 0.5kb downstream 500 false Chr1: 10902535-10903034 Arabidopsis thaliana
AT1G30730 1.0kb upstream 1.0kb upstream 2681 true Chr1: 10899854-10902534 Arabidopsis thaliana
AT1G30730 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10899854-10900853 Arabidopsis thaliana
AT1G30730 1.0kb downstream 1.0kb downstream 2681 true Chr1: 10900854-10903534 Arabidopsis thaliana
AT1G30730 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10902535-10903534 Arabidopsis thaliana
AT1G30730 2.0kb upstream 2.0kb upstream 3681 true Chr1: 10898854-10902534 Arabidopsis thaliana
AT1G30730 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10898854-10900853 Arabidopsis thaliana
AT1G30730 2.0kb downstream 2.0kb downstream 3681 true Chr1: 10900854-10904534 Arabidopsis thaliana
AT1G30730 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10902535-10904534 Arabidopsis thaliana
AT1G30730 5.0kb upstream 5.0kb upstream 6681 true Chr1: 10895854-10902534 Arabidopsis thaliana
AT1G30730 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10895854-10900853 Arabidopsis thaliana
AT1G30730 5.0kb downstream 5.0kb downstream 6681 true Chr1: 10900854-10907534 Arabidopsis thaliana
AT1G30730 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10902535-10907534 Arabidopsis thaliana
AT1G30730 10.0kb upstream 10.0kb upstream 11681 true Chr1: 10890854-10902534 Arabidopsis thaliana
AT1G30730 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10890854-10900853 Arabidopsis thaliana
AT1G30730 10.0kb downstream 10.0kb downstream 11681 true Chr1: 10900854-10912534 Arabidopsis thaliana
AT1G30730 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10902535-10912534 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361197 5261 Brassicaceae View MSA
123798116 5264 Brassicales-Malvales View MSA
124295792 5266 SBM View MSA
124148135 5268 Malvidae View MSA
124073888 5270 Rosid View MSA
123750008 5271 Pentapetalae View MSA
122797707 5272 Eudicot View MSA
122049918 5273 Angiosperm View MSA
121351151 5274 Embryophyte View MSA
123426970 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.974       Low
cufflinks 4.537        
cufflinks 1.704        
cufflinks 7.037        
cufflinks 1.699        
cufflinks 14.833       High

0 Strain