Gene : RFNR2 A. thaliana TAIR10
Primary Identifier:  ? AT1G30510 Defline:  (1 of 2) PTHR19384:SF54 - FERREDOXIN--NADP REDUCTASE, ROOT ISOZYME 1, CHLOROPLASTIC-RELATED
Genomic Order:  3017 Name:  ? AT1G30510
Secondary Identifier:  ? PAC:19652119
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PHOTOALL-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-101 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G30510 0.5kb upstream 0.5kb upstream 2704 true Chr1: 10806985-10809688 Arabidopsis thaliana
AT1G30510 0.5kb upstream 0.5kb upstream 500 false Chr1: 10809189-10809688 Arabidopsis thaliana
AT1G30510 0.5kb downstream 0.5kb downstream 2704 true Chr1: 10806485-10809188 Arabidopsis thaliana
AT1G30510 0.5kb downstream 0.5kb downstream 500 false Chr1: 10806485-10806984 Arabidopsis thaliana
AT1G30510 1.0kb upstream 1.0kb upstream 3204 true Chr1: 10806985-10810188 Arabidopsis thaliana
AT1G30510 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10809189-10810188 Arabidopsis thaliana
AT1G30510 1.0kb downstream 1.0kb downstream 3204 true Chr1: 10805985-10809188 Arabidopsis thaliana
AT1G30510 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10805985-10806984 Arabidopsis thaliana
AT1G30510 2.0kb upstream 2.0kb upstream 4204 true Chr1: 10806985-10811188 Arabidopsis thaliana
AT1G30510 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10809189-10811188 Arabidopsis thaliana
AT1G30510 2.0kb downstream 2.0kb downstream 4204 true Chr1: 10804985-10809188 Arabidopsis thaliana
AT1G30510 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10804985-10806984 Arabidopsis thaliana
AT1G30510 5.0kb upstream 5.0kb upstream 7204 true Chr1: 10806985-10814188 Arabidopsis thaliana
AT1G30510 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10809189-10814188 Arabidopsis thaliana
AT1G30510 5.0kb downstream 5.0kb downstream 7204 true Chr1: 10801985-10809188 Arabidopsis thaliana
AT1G30510 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10801985-10806984 Arabidopsis thaliana
AT1G30510 10.0kb upstream 10.0kb upstream 12204 true Chr1: 10806985-10819188 Arabidopsis thaliana
AT1G30510 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10809189-10819188 Arabidopsis thaliana
AT1G30510 10.0kb downstream 10.0kb downstream 12204 true Chr1: 10796985-10809188 Arabidopsis thaliana
AT1G30510 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10796985-10806984 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124337411 5266 SBM View MSA
122363969 5261 Brassicaceae View MSA
123837439 5264 Brassicales-Malvales View MSA
124248953 5268 Malvidae View MSA
124064755 5270 Rosid View MSA
123736625 5271 Pentapetalae View MSA
122790491 5272 Eudicot View MSA
122045006 5273 Angiosperm View MSA
121347443 5274 Embryophyte View MSA
123424825 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.289        
cufflinks 7.61        
cufflinks 2.046       Low
cufflinks 12.086        
cufflinks 2.165        
cufflinks 19.267       High

0 Strain