Gene : AT1G29310 A. thaliana TAIR10
Defline:  (1 of 4) K10956 - protein transport protein SEC61 subunit alpha (SEC61A) Genomic Order:  2894
Name:  ? AT1G29310 Secondary Identifier:  ? PAC:19650225
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G29310 0.5kb upstream 0.5kb upstream 2897 true Chr1: 10251794-10254690 Arabidopsis thaliana
AT1G29310 0.5kb upstream 0.5kb upstream 500 false Chr1: 10251794-10252293 Arabidopsis thaliana
AT1G29310 0.5kb downstream 0.5kb downstream 2897 true Chr1: 10252294-10255190 Arabidopsis thaliana
AT1G29310 0.5kb downstream 0.5kb downstream 500 false Chr1: 10254691-10255190 Arabidopsis thaliana
AT1G29310 1.0kb upstream 1.0kb upstream 3397 true Chr1: 10251294-10254690 Arabidopsis thaliana
AT1G29310 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10251294-10252293 Arabidopsis thaliana
AT1G29310 1.0kb downstream 1.0kb downstream 3397 true Chr1: 10252294-10255690 Arabidopsis thaliana
AT1G29310 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10254691-10255690 Arabidopsis thaliana
AT1G29310 2.0kb upstream 2.0kb upstream 4397 true Chr1: 10250294-10254690 Arabidopsis thaliana
AT1G29310 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10250294-10252293 Arabidopsis thaliana
AT1G29310 2.0kb downstream 2.0kb downstream 4397 true Chr1: 10252294-10256690 Arabidopsis thaliana
AT1G29310 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10254691-10256690 Arabidopsis thaliana
AT1G29310 5.0kb upstream 5.0kb upstream 7397 true Chr1: 10247294-10254690 Arabidopsis thaliana
AT1G29310 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10247294-10252293 Arabidopsis thaliana
AT1G29310 5.0kb downstream 5.0kb downstream 7397 true Chr1: 10252294-10259690 Arabidopsis thaliana
AT1G29310 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10254691-10259690 Arabidopsis thaliana
AT1G29310 10.0kb upstream 10.0kb upstream 12397 true Chr1: 10242294-10254690 Arabidopsis thaliana
AT1G29310 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10242294-10252293 Arabidopsis thaliana
AT1G29310 10.0kb downstream 10.0kb downstream 12397 true Chr1: 10252294-10264690 Arabidopsis thaliana
AT1G29310 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10254691-10264690 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381063 5261 Brassicaceae View MSA
123832597 5264 Brassicales-Malvales View MSA
124347555 5266 SBM View MSA
124244481 5268 Malvidae View MSA
124061120 5270 Rosid View MSA
123743159 5271 Pentapetalae View MSA
122792380 5272 Eudicot View MSA
122043956 5273 Angiosperm View MSA
121349680 5274 Embryophyte View MSA
123426638 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.197        
cufflinks 22.694        
cufflinks 11.195       Low
cufflinks 25.922        
cufflinks 12.35       Low
cufflinks 31.497     High High

0 Strain