Gene : AT1G29500 A. thaliana TAIR10
Defline:  (1 of 9) PTHR31175//PTHR31175:SF1 - AUXIN-RESPONSIVE FAMILY PROTEIN // SAUR-LIKE AUXIN-RESPONSIVE PROTEIN-RELATED Genomic Order:  2916
Name:  ? AT1G29500 Secondary Identifier:  ? PAC:19649631
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G29500 0.5kb upstream 0.5kb upstream 1155 true Chr1: 10320710-10321864 Arabidopsis thaliana
AT1G29500 0.5kb upstream 0.5kb upstream 500 false Chr1: 10320710-10321209 Arabidopsis thaliana
AT1G29500 0.5kb downstream 0.5kb downstream 1155 true Chr1: 10321210-10322364 Arabidopsis thaliana
AT1G29500 0.5kb downstream 0.5kb downstream 500 false Chr1: 10321865-10322364 Arabidopsis thaliana
AT1G29500 1.0kb upstream 1.0kb upstream 1655 true Chr1: 10320210-10321864 Arabidopsis thaliana
AT1G29500 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10320210-10321209 Arabidopsis thaliana
AT1G29500 1.0kb downstream 1.0kb downstream 1655 true Chr1: 10321210-10322864 Arabidopsis thaliana
AT1G29500 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10321865-10322864 Arabidopsis thaliana
AT1G29500 2.0kb upstream 2.0kb upstream 2655 true Chr1: 10319210-10321864 Arabidopsis thaliana
AT1G29500 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10319210-10321209 Arabidopsis thaliana
AT1G29500 2.0kb downstream 2.0kb downstream 2655 true Chr1: 10321210-10323864 Arabidopsis thaliana
AT1G29500 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10321865-10323864 Arabidopsis thaliana
AT1G29500 5.0kb upstream 5.0kb upstream 5655 true Chr1: 10316210-10321864 Arabidopsis thaliana
AT1G29500 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10316210-10321209 Arabidopsis thaliana
AT1G29500 5.0kb downstream 5.0kb downstream 5655 true Chr1: 10321210-10326864 Arabidopsis thaliana
AT1G29500 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10321865-10326864 Arabidopsis thaliana
AT1G29500 10.0kb upstream 10.0kb upstream 10655 true Chr1: 10311210-10321864 Arabidopsis thaliana
AT1G29500 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10311210-10321209 Arabidopsis thaliana
AT1G29500 10.0kb downstream 10.0kb downstream 10655 true Chr1: 10321210-10331864 Arabidopsis thaliana
AT1G29500 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10321865-10331864 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381265 5261 Brassicaceae View MSA
123841637 5264 Brassicales-Malvales View MSA
124348096 5266 SBM View MSA
124254244 5268 Malvidae View MSA
124073380 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.511        
cufflinks 0.023     Low Low
cufflinks 3.273        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.048        
cufflinks 0.047     Low  

0 Strain