Gene : AT1G29960 A. thaliana TAIR10
Defline:  (1 of 3) K09647 - mitochondrial inner membrane protease subunit 1 (IMP1) Genomic Order:  2962
Name:  ? AT1G29960 Secondary Identifier:  ? PAC:19650301
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G29960 0.5kb upstream 0.5kb upstream 1964 true Chr1: 10494207-10496170 Arabidopsis thaliana
AT1G29960 0.5kb upstream 0.5kb upstream 500 false Chr1: 10494207-10494706 Arabidopsis thaliana
AT1G29960 0.5kb downstream 0.5kb downstream 1964 true Chr1: 10494707-10496670 Arabidopsis thaliana
AT1G29960 0.5kb downstream 0.5kb downstream 500 false Chr1: 10496171-10496670 Arabidopsis thaliana
AT1G29960 1.0kb upstream 1.0kb upstream 2464 true Chr1: 10493707-10496170 Arabidopsis thaliana
AT1G29960 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10493707-10494706 Arabidopsis thaliana
AT1G29960 1.0kb downstream 1.0kb downstream 2464 true Chr1: 10494707-10497170 Arabidopsis thaliana
AT1G29960 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10496171-10497170 Arabidopsis thaliana
AT1G29960 2.0kb upstream 2.0kb upstream 3464 true Chr1: 10492707-10496170 Arabidopsis thaliana
AT1G29960 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10492707-10494706 Arabidopsis thaliana
AT1G29960 2.0kb downstream 2.0kb downstream 3464 true Chr1: 10494707-10498170 Arabidopsis thaliana
AT1G29960 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10496171-10498170 Arabidopsis thaliana
AT1G29960 5.0kb upstream 5.0kb upstream 6464 true Chr1: 10489707-10496170 Arabidopsis thaliana
AT1G29960 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10489707-10494706 Arabidopsis thaliana
AT1G29960 5.0kb downstream 5.0kb downstream 6464 true Chr1: 10494707-10501170 Arabidopsis thaliana
AT1G29960 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10496171-10501170 Arabidopsis thaliana
AT1G29960 10.0kb upstream 10.0kb upstream 11464 true Chr1: 10484707-10496170 Arabidopsis thaliana
AT1G29960 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10484707-10494706 Arabidopsis thaliana
AT1G29960 10.0kb downstream 10.0kb downstream 11464 true Chr1: 10494707-10506170 Arabidopsis thaliana
AT1G29960 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10496171-10506170 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360961 5261 Brassicaceae View MSA
123827960 5264 Brassicales-Malvales View MSA
124349335 5266 SBM View MSA
124253353 5268 Malvidae View MSA
124064191 5270 Rosid View MSA
123740275 5271 Pentapetalae View MSA
122796952 5272 Eudicot View MSA
122051695 5273 Angiosperm View MSA
123428894 5275 Viridiplantae View MSA
121348112 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.101        
cufflinks 5.294        
cufflinks 3.29       Low
cufflinks 5.578        
cufflinks 3.192       Low
cufflinks 5.391        

0 Strain