Gene : AT1G28140 A. thaliana TAIR10
Defline:  (1 of 1) PTHR36716:SF2 - F3H9.20 PROTEIN Genomic Order:  2792
Name:  ? AT1G28140 Secondary Identifier:  ? PAC:19657326
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G28140 0.5kb upstream 0.5kb upstream 2112 true Chr1: 9832816-9834927 Arabidopsis thaliana
AT1G28140 0.5kb upstream 0.5kb upstream 500 false Chr1: 9834428-9834927 Arabidopsis thaliana
AT1G28140 0.5kb downstream 0.5kb downstream 2112 true Chr1: 9832316-9834427 Arabidopsis thaliana
AT1G28140 0.5kb downstream 0.5kb downstream 500 false Chr1: 9832316-9832815 Arabidopsis thaliana
AT1G28140 1.0kb upstream 1.0kb upstream 2612 true Chr1: 9832816-9835427 Arabidopsis thaliana
AT1G28140 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9834428-9835427 Arabidopsis thaliana
AT1G28140 1.0kb downstream 1.0kb downstream 2612 true Chr1: 9831816-9834427 Arabidopsis thaliana
AT1G28140 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9831816-9832815 Arabidopsis thaliana
AT1G28140 2.0kb upstream 2.0kb upstream 3612 true Chr1: 9832816-9836427 Arabidopsis thaliana
AT1G28140 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9834428-9836427 Arabidopsis thaliana
AT1G28140 2.0kb downstream 2.0kb downstream 3612 true Chr1: 9830816-9834427 Arabidopsis thaliana
AT1G28140 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9830816-9832815 Arabidopsis thaliana
AT1G28140 5.0kb upstream 5.0kb upstream 6612 true Chr1: 9832816-9839427 Arabidopsis thaliana
AT1G28140 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9834428-9839427 Arabidopsis thaliana
AT1G28140 5.0kb downstream 5.0kb downstream 6612 true Chr1: 9827816-9834427 Arabidopsis thaliana
AT1G28140 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9827816-9832815 Arabidopsis thaliana
AT1G28140 10.0kb upstream 10.0kb upstream 11612 true Chr1: 9832816-9844427 Arabidopsis thaliana
AT1G28140 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9834428-9844427 Arabidopsis thaliana
AT1G28140 10.0kb downstream 10.0kb downstream 11612 true Chr1: 9822816-9834427 Arabidopsis thaliana
AT1G28140 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9822816-9832815 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364351 5261 Brassicaceae View MSA
123834572 5264 Brassicales-Malvales View MSA
124341805 5266 SBM View MSA
124241619 5268 Malvidae View MSA
124066524 5270 Rosid View MSA
123738550 5271 Pentapetalae View MSA
122793867 5272 Eudicot View MSA
122042294 5273 Angiosperm View MSA
121344555 5274 Embryophyte View MSA
123424040 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 64.326     High  
cufflinks 10.07        
cufflinks 73.326     High  
cufflinks 9.363        
cufflinks 77.008     High  
cufflinks 6.669       Low

0 Strain